Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694999
Identifier: 209694999
GI number: 209694999
Start: 1599131
End: 1599523
Strand: Direct
Name: 209694999
Synonym: VSAL_I1489
Alternate gene names: NA
Gene position: 1599131-1599523 (Clockwise)
Preceding gene: 209694998
Following gene: 209695001
Centisome position: 48.09
GC content: 37.66
Gene sequence:
>393_bases ATGACAACATTAACTGAAAAACCAGGTATTACCCTTATCAAATCAGGTAGCTTTAAATTAAACGACCTTAGCCAATTATT AAATGTATCGGGCTTAAAAAGCGATATGGCTGAGGTTGCAGTAACTAATAATACTAATTCATTAACAATGGGTCATTTCA CAATGTCTCCAGGCGTTGAATTTGAATATATTTATGATTCAGTAGAGTACAAAGTGATCACGAAAGGCAAGATTGTTGTT CGTGACACCGAAGGGAATAAATACGTTGCTGAAGTTGGTGATGTAATTTTATTCTCGCCTGATGTAACGGTTATTTTTGA TGCAGAAAGTGACGGTGAAGCTATTTATACAGCGCACCGTGCAGCCGCCGCTGATTTCGCTCCTGCTAAATAA
Upstream 100 bases:
>100_bases TCAGTGGCATACCAACGAGGTATACCACCTTGATTTTAATTAATATAACGATGTGTTGTGTTAAAGGTGGACATTAAACA AATATAACGAGAATTATTTA
Downstream 100 bases:
>100_bases TAAAGAGACGAATTCAATCGTAAAGCCTGTATTTATGCAGGCTTTTTTTATTTATATCAAATTAGAATAATGAGATTTGA GCGGAATGATGTTCGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTLTEKPGITLIKSGSFKLNDLSQLLNVSGLKSDMAEVAVTNNTNSLTMGHFTMSPGVEFEYIYDSVEYKVITKGKIVV RDTEGNKYVAEVGDVILFSPDVTVIFDAESDGEAIYTAHRAAAADFAPAK
Sequences:
>Translated_130_residues MTTLTEKPGITLIKSGSFKLNDLSQLLNVSGLKSDMAEVAVTNNTNSLTMGHFTMSPGVEFEYIYDSVEYKVITKGKIVV RDTEGNKYVAEVGDVILFSPDVTVIFDAESDGEAIYTAHRAAAADFAPAK >Mature_129_residues TTLTEKPGITLIKSGSFKLNDLSQLLNVSGLKSDMAEVAVTNNTNSLTMGHFTMSPGVEFEYIYDSVEYKVITKGKIVVR DTEGNKYVAEVGDVILFSPDVTVIFDAESDGEAIYTAHRAAAADFAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14044; Mature: 13913
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTEKPGITLIKSGSFKLNDLSQLLNVSGLKSDMAEVAVTNNTNSLTMGHFTMSPGVE CCCCCCCCCEEEEECCCEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCE FEYIYDSVEYKVITKGKIVVRDTEGNKYVAEVGDVILFSPDVTVIFDAESDGEAIYTAHR EEEEECCEEEEEEECCEEEEEECCCCEEEECCCCEEEECCCEEEEEECCCCCCEEEEECC AAAADFAPAK CCCCCCCCCC >Mature Secondary Structure TTLTEKPGITLIKSGSFKLNDLSQLLNVSGLKSDMAEVAVTNNTNSLTMGHFTMSPGVE CCCCCCCCEEEEECCCEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCE FEYIYDSVEYKVITKGKIVVRDTEGNKYVAEVGDVILFSPDVTVIFDAESDGEAIYTAHR EEEEECCEEEEEEECCEEEEEECCCCEEEECCCCEEEECCCEEEEEECCCCCCEEEEECC AAAADFAPAK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA