Click here to switch to the map view.

The map label for this gene is inlJ [H]

Identifier: 209694998

GI number: 209694998

Start: 1597367

End: 1598788

Strand: Direct

Name: inlJ [H]

Synonym: VSAL_I1488

Alternate gene names: 209694998

Gene position: 1597367-1598788 (Clockwise)

Preceding gene: 209694997

Following gene: 209694999

Centisome position: 48.04

GC content: 37.27

Gene sequence:

>1422_bases
ATGAAGATGTCGACGTTAACATTGGGCTTTCTTAGTCTTGGTTTTTTGAATACGTTTAGCTATGCGAGTCAGCCAATATT
AATAAGTGATGTTGACTTTAATGATCCTCAGTTTTCTCTTTGTGTTGAGAAACAGAACCAACCAGTATTAGAGAAAATCA
AAGCATTAAATTGTAATCGTATGGGGATTCATTCCGTCGATGAAATTCAATTCATGCCTGCTTTGAAAGTGATTTTATTG
TCGAATAATCAAATTGAAACGATTGATACGTCTGCTGTTGTTAATTTAGAACGATTAGTCATTGAGGGGAATCAACTATC
GTCGCTTAATCTCTCTTCAAATCAACATCTTAATTTTATTAATGTGCGTAATAATCAATTGAAAACGTTAGATTTCAGTC
AACAATCGCAGTTAATTAAAATAAAAGCGGATTACAATCAACTGAGTGAGATTGATTTTGGTTCGAGTGAGGCGTTAGTT
GCCGTTGAGGTGAATAATAATCAATTAACTCGTATTGATGTATCTCCATTAACGAAATTAAAAGAAGTGATTGCGTTTAA
TAATCCGCTGACTGACATAATATTGCCAAGTACGAATGAGCTTAAATTACTGTCTGTTGAAGGAACCCCTTACGCTAAAA
GTCAAACCGGTACGTTAGTCGGGAAAGGGATATCAAATCTAGAGGCACCACGAGTGAGTATTATTGAGGGAGGTTTGATT
TCTAAAAATAATGATAAATATGACATGTTTTCCTCTCAGTTAGTGACTCCGTCGGTTGGGCAATATATTGGTATCCGTTA
CGCCGTCGAACCGCCAATACAAGATAATGATAAAGCAGCAGATCCACACTCAAAAATGCGAGTGAAACTCCCTATCACAG
TGCGTATGACACACCCTGAAATTATCGATCCTAAAACGGGTAAACGTTCTACGGTGTCTAGTTGGACGGATACTATGTTT
AAGCATAATAATAATTTGGCGATGTGGTATTTCGGTGATAAATCGGAGTTGGTGTCAGGCCGTTGGACGCTAGAAATTTT
GTATGCTGGTTCTGTTCTTGCGAAACGCTCATTTGAAGTCGCGAATCTTGATGAGCTTGCGGCTGAGAAAAAGCGAGAGT
TGGAATCGCGTAAAGAGTTACTCAAGGTAGTCCTTACCATGAATAAAACGCTGTGTGGAGGAACGAAATTTCGTCGTTGT
ATGGAATTTTCCTCGACCGACCACTGTGAAGTAAATATCGAGCCTTATAAAAAACGTTGTATGTCTATTGCTTTTGATAA
AGTGAAAAAACAGGCCGAAAAAGGTACATCTAAAGATATAATTAGAATGGTATTTAGTCATTATTCTAGCTGTATAGGAT
CCAGTTATATACAAGAATCAAAGCTAGATGCGAAAAAAGTAGGCTTATGTTTTCGCCAATGA

Upstream 100 bases:

>100_bases
TGAATTTTATAATATGATGGGTCTAACGTAGACGCTTGTTTTTAAACATTTTACATTAGTAAGTTAAACTATAATAAAGT
GACAATAAGGATCATTAAAA

Downstream 100 bases:

>100_bases
TTCGATATAAATAATAGTAAAGAAACGCTTTAAAACTCAAAGCGGAGTAGAGTGTTCTACTCCGCTTTTTTATTAAACTT
TACCTTTACGAGGTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKMSTLTLGFLSLGFLNTFSYASQPILISDVDFNDPQFSLCVEKQNQPVLEKIKALNCNRMGIHSVDEIQFMPALKVILL
SNNQIETIDTSAVVNLERLVIEGNQLSSLNLSSNQHLNFINVRNNQLKTLDFSQQSQLIKIKADYNQLSEIDFGSSEALV
AVEVNNNQLTRIDVSPLTKLKEVIAFNNPLTDIILPSTNELKLLSVEGTPYAKSQTGTLVGKGISNLEAPRVSIIEGGLI
SKNNDKYDMFSSQLVTPSVGQYIGIRYAVEPPIQDNDKAADPHSKMRVKLPITVRMTHPEIIDPKTGKRSTVSSWTDTMF
KHNNNLAMWYFGDKSELVSGRWTLEILYAGSVLAKRSFEVANLDELAAEKKRELESRKELLKVVLTMNKTLCGGTKFRRC
MEFSSTDHCEVNIEPYKKRCMSIAFDKVKKQAEKGTSKDIIRMVFSHYSSCIGSSYIQESKLDAKKVGLCFRQ

Sequences:

>Translated_473_residues
MKMSTLTLGFLSLGFLNTFSYASQPILISDVDFNDPQFSLCVEKQNQPVLEKIKALNCNRMGIHSVDEIQFMPALKVILL
SNNQIETIDTSAVVNLERLVIEGNQLSSLNLSSNQHLNFINVRNNQLKTLDFSQQSQLIKIKADYNQLSEIDFGSSEALV
AVEVNNNQLTRIDVSPLTKLKEVIAFNNPLTDIILPSTNELKLLSVEGTPYAKSQTGTLVGKGISNLEAPRVSIIEGGLI
SKNNDKYDMFSSQLVTPSVGQYIGIRYAVEPPIQDNDKAADPHSKMRVKLPITVRMTHPEIIDPKTGKRSTVSSWTDTMF
KHNNNLAMWYFGDKSELVSGRWTLEILYAGSVLAKRSFEVANLDELAAEKKRELESRKELLKVVLTMNKTLCGGTKFRRC
MEFSSTDHCEVNIEPYKKRCMSIAFDKVKKQAEKGTSKDIIRMVFSHYSSCIGSSYIQESKLDAKKVGLCFRQ
>Mature_473_residues
MKMSTLTLGFLSLGFLNTFSYASQPILISDVDFNDPQFSLCVEKQNQPVLEKIKALNCNRMGIHSVDEIQFMPALKVILL
SNNQIETIDTSAVVNLERLVIEGNQLSSLNLSSNQHLNFINVRNNQLKTLDFSQQSQLIKIKADYNQLSEIDFGSSEALV
AVEVNNNQLTRIDVSPLTKLKEVIAFNNPLTDIILPSTNELKLLSVEGTPYAKSQTGTLVGKGISNLEAPRVSIIEGGLI
SKNNDKYDMFSSQLVTPSVGQYIGIRYAVEPPIQDNDKAADPHSKMRVKLPITVRMTHPEIIDPKTGKRSTVSSWTDTMF
KHNNNLAMWYFGDKSELVSGRWTLEILYAGSVLAKRSFEVANLDELAAEKKRELESRKELLKVVLTMNKTLCGGTKFRRC
MEFSSTDHCEVNIEPYKKRCMSIAFDKVKKQAEKGTSKDIIRMVFSHYSSCIGSSYIQESKLDAKKVGLCFRQ

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 53072; Mature: 53072

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSTLTLGFLSLGFLNTFSYASQPILISDVDFNDPQFSLCVEKQNQPVLEKIKALNCNR
CCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCC
MGIHSVDEIQFMPALKVILLSNNQIETIDTSAVVNLERLVIEGNQLSSLNLSSNQHLNFI
CCCCCHHHHHHCCEEEEEEECCCCEEEECCHHHEEEEEEEEECCCEEEEECCCCCCEEEE
NVRNNQLKTLDFSQQSQLIKIKADYNQLSEIDFGSSEALVAVEVNNNQLTRIDVSPLTKL
EECCCEEEEEECCCCCCEEEEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEECHHHHHH
KEVIAFNNPLTDIILPSTNELKLLSVEGTPYAKSQTGTLVGKGISNLEAPRVSIIEGGLI
HHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEE
SKNNDKYDMFSSQLVTPSVGQYIGIRYAVEPPIQDNDKAADPHSKMRVKLPITVRMTHPE
CCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCC
IIDPKTGKRSTVSSWTDTMFKHNNNLAMWYFGDKSELVSGRWTLEILYAGSVLAKRSFEV
EECCCCCCCCHHHHHHHHHHEECCCEEEEEECCHHHEECCCEEEEEEEECCCHHHCCCCC
ANLDELAAEKKRELESRKELLKVVLTMNKTLCGGTKFRRCMEFSSTDHCEVNIEPYKKRC
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHH
MSIAFDKVKKQAEKGTSKDIIRMVFSHYSSCIGSSYIQESKLDAKKVGLCFRQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure
MKMSTLTLGFLSLGFLNTFSYASQPILISDVDFNDPQFSLCVEKQNQPVLEKIKALNCNR
CCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCC
MGIHSVDEIQFMPALKVILLSNNQIETIDTSAVVNLERLVIEGNQLSSLNLSSNQHLNFI
CCCCCHHHHHHCCEEEEEEECCCCEEEECCHHHEEEEEEEEECCCEEEEECCCCCCEEEE
NVRNNQLKTLDFSQQSQLIKIKADYNQLSEIDFGSSEALVAVEVNNNQLTRIDVSPLTKL
EECCCEEEEEECCCCCCEEEEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEECHHHHHH
KEVIAFNNPLTDIILPSTNELKLLSVEGTPYAKSQTGTLVGKGISNLEAPRVSIIEGGLI
HHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEE
SKNNDKYDMFSSQLVTPSVGQYIGIRYAVEPPIQDNDKAADPHSKMRVKLPITVRMTHPE
CCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCC
IIDPKTGKRSTVSSWTDTMFKHNNNLAMWYFGDKSELVSGRWTLEILYAGSVLAKRSFEV
EECCCCCCCCHHHHHHHHHHEECCCEEEEEECCHHHEECCCEEEEEEEECCCHHHCCCCC
ANLDELAAEKKRELESRKELLKVVLTMNKTLCGGTKFRRCMEFSSTDHCEVNIEPYKKRC
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHH
MSIAFDKVKKQAEKGTSKDIIRMVFSHYSSCIGSSYIQESKLDAKKVGLCFRQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]