Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
---|---|
Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yhfO [H]
Identifier: 209694986
GI number: 209694986
Start: 1588003
End: 1588503
Strand: Direct
Name: yhfO [H]
Synonym: VSAL_I1473
Alternate gene names: 209694986
Gene position: 1588003-1588503 (Clockwise)
Preceding gene: 209694985
Following gene: 209694987
Centisome position: 47.76
GC content: 34.93
Gene sequence:
>501_bases GTGGATGGTATTTTTCATTCCATATGGCTCTTTCTCATTAAAAATGGAGTTATTTATATGGAAATAGTAAAAGTAAAACT TGGTGAGCTAGGAATTGTTAGCCCGCTGTTTGATGCATATCGTGTGTTTTATGGACAAAAGAGTAACTCAGAATTAGCTT TTGATTTCTTATCTCAAAGAGTTAAAAATGAAGAGTCAGTCATATTTTTAGCATTAAATGAGAGTGGTGAAGGCATGGGT TTTACTCAACTTTATCATGGCTTCTCATCAGTATCAGCAGCTAGAGTATGGGTATTAAATGATTTGTATGTTGCACCTGA GTTTAGGAATAATGGCGTAGCAAAACAGTTAATGAATGCAGCAAAAGAGTTGGCTTTAGTGGATAACGTAAAAGGGTTAT CGTTAGAGACAGCAGAAGATAATGTAAACGCTCAGAAGCTTTATGAATCTCTAGGCTATGTTAGAGAATTAGGAACGTAT CATTACTTCTTGAAGCTATAG
Upstream 100 bases:
>100_bases CGCAGTGTTTAAGCATGTATGGTCGTATTTCGTAGAAAAGCCAGTCAATGCGCTTTATCGAGTAGATGTCGGCTAGCAAA CAATTTAAGAGCGATTTTCA
Downstream 100 bases:
>100_bases GCATCAATGTAAGCATTGACTTTGATAATCAAATATTTAAATTAGAAAATTCTTGGTTATCAGCAATATAACTAAATGCA GCAATATTTTTATGACCTTT
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDGIFHSIWLFLIKNGVIYMEIVKVKLGELGIVSPLFDAYRVFYGQKSNSELAFDFLSQRVKNEESVIFLALNESGEGMG FTQLYHGFSSVSAARVWVLNDLYVAPEFRNNGVAKQLMNAAKELALVDNVKGLSLETAEDNVNAQKLYESLGYVRELGTY HYFLKL
Sequences:
>Translated_166_residues MDGIFHSIWLFLIKNGVIYMEIVKVKLGELGIVSPLFDAYRVFYGQKSNSELAFDFLSQRVKNEESVIFLALNESGEGMG FTQLYHGFSSVSAARVWVLNDLYVAPEFRNNGVAKQLMNAAKELALVDNVKGLSLETAEDNVNAQKLYESLGYVRELGTY HYFLKL >Mature_166_residues MDGIFHSIWLFLIKNGVIYMEIVKVKLGELGIVSPLFDAYRVFYGQKSNSELAFDFLSQRVKNEESVIFLALNESGEGMG FTQLYHGFSSVSAARVWVLNDLYVAPEFRNNGVAKQLMNAAKELALVDNVKGLSLETAEDNVNAQKLYESLGYVRELGTY HYFLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 18747; Mature: 18747
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIFHSIWLFLIKNGVIYMEIVKVKLGELGIVSPLFDAYRVFYGQKSNSELAFDFLSQR CCHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VKNEESVIFLALNESGEGMGFTQLYHGFSSVSAARVWVLNDLYVAPEFRNNGVAKQLMNA HCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECEEECCCCCCCCHHHHHHHH AKELALVDNVKGLSLETAEDNVNAQKLYESLGYVRELGTYHYFLKL HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MDGIFHSIWLFLIKNGVIYMEIVKVKLGELGIVSPLFDAYRVFYGQKSNSELAFDFLSQR CCHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VKNEESVIFLALNESGEGMGFTQLYHGFSSVSAARVWVLNDLYVAPEFRNNGVAKQLMNA HCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECEEECCCCCCCCHHHHHHHH AKELALVDNVKGLSLETAEDNVNAQKLYESLGYVRELGTYHYFLKL HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]