The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694974

Identifier: 209694974

GI number: 209694974

Start: 1575814

End: 1576692

Strand: Direct

Name: 209694974

Synonym: VSAL_I1457

Alternate gene names: NA

Gene position: 1575814-1576692 (Clockwise)

Preceding gene: 209694973

Following gene: 209694975

Centisome position: 47.39

GC content: 37.54

Gene sequence:

>879_bases
ATGACATCTATAGTTTGCTGGAGAAACGCAGAACAAGAAAAAAGTCCTGCTTGGGTTATGTGGGATGGCTTGTGGGCTGT
TAGTGATACAAGGGTATCGGATAGCGGCTCAGTCATGACTGATAATTGTCCAAAAGTAACCTCGATATCAGCGTTTACTT
ATAAAAATTCAGATATTCATCGAAGCAATCCTAAGTGTTTATTTAGGTTCGGCTTCGGTTTTGCCGGAAGCACATTGATT
GGAAGTAATGTTAGAGAAATACTAAGCACTTTTGTTGGTAATCTATCTGAAGTGCATTATTACGATCAGCCTGATTATCC
TTATGAAGATAAGCTACCCTCACTTATGGAAATTTCCGAGCTGTGCAAAAAGCTTGGTGAAAAGTATATATCTAGTTTAG
GTTTCAGTTTTCCAAGGAGAGTTGGATGTGAGTTTTTAATATTTGGTTGTTGTCCTAAAACAAAAGAGTACCGAACCATA
ATGCTACGAAATTCACCCGATAATCCCGCAGTACTTAATATTATTGAAAAATCATTGAATGACACAGAGTATCTTGTACT
TGGTGATCAAAAAGAACGTGTAGCGACTAAAATTGAAGCCATAAAACATCAACTCGTATCGAAAGGTAAGCAAGTACGTA
ATGCTCCAATATATGCACTTGAGTCTATTTTGGAAGAGGACAATGGAACTATTGGCGGCTTCCTTCAATTATGCATATCG
ACCGTTGTTGATACTAAACAGTTTTTTATATCGACAGATAAAAATGACAAAAATAACTACCAAGTTGCGGGGTTTAGTTT
AATGAGCGAGCTTTCTATACTTGGTGGTTTTTCGGTATCTATGCCCGGTGGTCTATCAATCCCAAGGTTAGTCGAATAA

Upstream 100 bases:

>100_bases
AAAGGCTAGTAAGCCTTAATAGAATAAGTAGCGACAAATCTGGTAGGGAACTATAAGACATTTTGTCGTAGAAAGAGCGT
TAAGTTTTTTTGGAGTTTAG

Downstream 100 bases:

>100_bases
AAACTTAACAAGCAATTTAAGAGTGATTCCCCACGCTTGGCATTTTCAGTTTGGGTCAATTTTAGTGATTACGGTGTTCC
AGTTGAGTGTCGTGGTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTSIVCWRNAEQEKSPAWVMWDGLWAVSDTRVSDSGSVMTDNCPKVTSISAFTYKNSDIHRSNPKCLFRFGFGFAGSTLI
GSNVREILSTFVGNLSEVHYYDQPDYPYEDKLPSLMEISELCKKLGEKYISSLGFSFPRRVGCEFLIFGCCPKTKEYRTI
MLRNSPDNPAVLNIIEKSLNDTEYLVLGDQKERVATKIEAIKHQLVSKGKQVRNAPIYALESILEEDNGTIGGFLQLCIS
TVVDTKQFFISTDKNDKNNYQVAGFSLMSELSILGGFSVSMPGGLSIPRLVE

Sequences:

>Translated_292_residues
MTSIVCWRNAEQEKSPAWVMWDGLWAVSDTRVSDSGSVMTDNCPKVTSISAFTYKNSDIHRSNPKCLFRFGFGFAGSTLI
GSNVREILSTFVGNLSEVHYYDQPDYPYEDKLPSLMEISELCKKLGEKYISSLGFSFPRRVGCEFLIFGCCPKTKEYRTI
MLRNSPDNPAVLNIIEKSLNDTEYLVLGDQKERVATKIEAIKHQLVSKGKQVRNAPIYALESILEEDNGTIGGFLQLCIS
TVVDTKQFFISTDKNDKNNYQVAGFSLMSELSILGGFSVSMPGGLSIPRLVE
>Mature_291_residues
TSIVCWRNAEQEKSPAWVMWDGLWAVSDTRVSDSGSVMTDNCPKVTSISAFTYKNSDIHRSNPKCLFRFGFGFAGSTLIG
SNVREILSTFVGNLSEVHYYDQPDYPYEDKLPSLMEISELCKKLGEKYISSLGFSFPRRVGCEFLIFGCCPKTKEYRTIM
LRNSPDNPAVLNIIEKSLNDTEYLVLGDQKERVATKIEAIKHQLVSKGKQVRNAPIYALESILEEDNGTIGGFLQLCIST
VVDTKQFFISTDKNDKNNYQVAGFSLMSELSILGGFSVSMPGGLSIPRLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32630; Mature: 32498

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIVCWRNAEQEKSPAWVMWDGLWAVSDTRVSDSGSVMTDNCPKVTSISAFTYKNSDIH
CCCEEEECCCCCCCCCEEEEECCEEEEECCEECCCCCEEECCCCCCEEEEEEEECCCCCC
RSNPKCLFRFGFGFAGSTLIGSNVREILSTFVGNLSEVHYYDQPDYPYEDKLPSLMEISE
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCHHHHHHH
LCKKLGEKYISSLGFSFPRRVGCEFLIFGCCPKTKEYRTIMLRNSPDNPAVLNIIEKSLN
HHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
DTEYLVLGDQKERVATKIEAIKHQLVSKGKQVRNAPIYALESILEEDNGTIGGFLQLCIS
CCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
TVVDTKQFFISTDKNDKNNYQVAGFSLMSELSILGGFSVSMPGGLSIPRLVE
HHHCCHHHEEECCCCCCCCEEEEHHHHHHHHHHHCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSIVCWRNAEQEKSPAWVMWDGLWAVSDTRVSDSGSVMTDNCPKVTSISAFTYKNSDIH
CCEEEECCCCCCCCCEEEEECCEEEEECCEECCCCCEEECCCCCCEEEEEEEECCCCCC
RSNPKCLFRFGFGFAGSTLIGSNVREILSTFVGNLSEVHYYDQPDYPYEDKLPSLMEISE
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCHHHHHHH
LCKKLGEKYISSLGFSFPRRVGCEFLIFGCCPKTKEYRTIMLRNSPDNPAVLNIIEKSLN
HHHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
DTEYLVLGDQKERVATKIEAIKHQLVSKGKQVRNAPIYALESILEEDNGTIGGFLQLCIS
CCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
TVVDTKQFFISTDKNDKNNYQVAGFSLMSELSILGGFSVSMPGGLSIPRLVE
HHHCCHHHEEECCCCCCCCEEEEHHHHHHHHHHHCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA