Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is rimL [H]
Identifier: 209694973
GI number: 209694973
Start: 1575087
End: 1575620
Strand: Direct
Name: rimL [H]
Synonym: VSAL_I1456
Alternate gene names: 209694973
Gene position: 1575087-1575620 (Clockwise)
Preceding gene: 209694972
Following gene: 209694974
Centisome position: 47.37
GC content: 39.7
Gene sequence:
>534_bases ATGTTTACAGTAGAAGTTGACAGTGAATTGAAATTGGCACTTATTGAGCCCTCTTTTGCTAAAAAGTACTTTGAGATCGT CTCGAAGGAAGAAGCCTATTTATCTCAATGGCTAGCTTGGCCGTCACACGCAAAATCTGAGGATTTCTTTCTACGCTTTG TGCGTAAATCGTTACTTGATCATGCCGAAGGTAAAGGAATGGTTTGCGCCATGATTTACCAAGGTGAGTTGGTTGGTAAT GTCAGCTTCAATAAAATTAATCATCTGTTAAAAATGGCTGAAATTGGTTATTGGCTCAGTGAGTCTTATCAGGGGAACGG CATTATTACTCGTGCAGTGTCCAAGTTAATCGAGATTGCTTTCACAGATTTACAGCTTGAGAAAATTCAAATAGCAGCAG GTGAGCACAACCTACCAAGCCGCAAGGTTTGTGAACGTTTAGGCATGACATTAGAAGGCATTATTTCTAATCGCGAAAAC TTAAATGGCCGTATTATCAATCATGCTATTTATGGTTTATCGAAGCAGGCTTAG
Upstream 100 bases:
>100_bases AAATTAGAAGTTAAAGGCAAAACAAAAAGAAATCACATGAAATTTACCCAGCAAATGGTATGATGTACGCAAGATTAATG ACCACCTCAAAGGATGGCTT
Downstream 100 bases:
>100_bases TGCTAACCGCATAAAGCGGCATGTTGCCGCATAGGATGAATGCTGCGACTTATATAATATAGTTTATGGTGTTGATTTAT TTGAGTTTAAGAAAAAGGCT
Product: ribosomal-protein-serine acetyltransferase
Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MFTVEVDSELKLALIEPSFAKKYFEIVSKEEAYLSQWLAWPSHAKSEDFFLRFVRKSLLDHAEGKGMVCAMIYQGELVGN VSFNKINHLLKMAEIGYWLSESYQGNGIITRAVSKLIEIAFTDLQLEKIQIAAGEHNLPSRKVCERLGMTLEGIISNREN LNGRIINHAIYGLSKQA
Sequences:
>Translated_177_residues MFTVEVDSELKLALIEPSFAKKYFEIVSKEEAYLSQWLAWPSHAKSEDFFLRFVRKSLLDHAEGKGMVCAMIYQGELVGN VSFNKINHLLKMAEIGYWLSESYQGNGIITRAVSKLIEIAFTDLQLEKIQIAAGEHNLPSRKVCERLGMTLEGIISNREN LNGRIINHAIYGLSKQA >Mature_177_residues MFTVEVDSELKLALIEPSFAKKYFEIVSKEEAYLSQWLAWPSHAKSEDFFLRFVRKSLLDHAEGKGMVCAMIYQGELVGN VSFNKINHLLKMAEIGYWLSESYQGNGIITRAVSKLIEIAFTDLQLEKIQIAAGEHNLPSRKVCERLGMTLEGIISNREN LNGRIINHAIYGLSKQA
Specific function: Putative N-acetyltransferase. May act on ribosomal proteins (Potential) [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787697, Length=160, Percent_Identity=34.375, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 20052; Mature: 20052
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVEVDSELKLALIEPSFAKKYFEIVSKEEAYLSQWLAWPSHAKSEDFFLRFVRKSLLD CEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HAEGKGMVCAMIYQGELVGNVSFNKINHLLKMAEIGYWLSESYQGNGIITRAVSKLIEIA HCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FTDLQLEKIQIAAGEHNLPSRKVCERLGMTLEGIISNRENLNGRIINHAIYGLSKQA HHCCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEHHHHHHCCCCCC >Mature Secondary Structure MFTVEVDSELKLALIEPSFAKKYFEIVSKEEAYLSQWLAWPSHAKSEDFFLRFVRKSLLD CEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HAEGKGMVCAMIYQGELVGNVSFNKINHLLKMAEIGYWLSESYQGNGIITRAVSKLIEIA HCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FTDLQLEKIQIAAGEHNLPSRKVCERLGMTLEGIISNRENLNGRIINHAIYGLSKQA HHCCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]
Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]