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The map label for this gene is rpfG [H]

Identifier: 209694964

GI number: 209694964

Start: 1563304

End: 1565457

Strand: Direct

Name: rpfG [H]

Synonym: VSAL_I1447

Alternate gene names: 209694964

Gene position: 1563304-1565457 (Clockwise)

Preceding gene: 209694963

Following gene: 209694966

Centisome position: 47.01

GC content: 35.28

Gene sequence:

>2154_bases
GTGTATAAATTGAAATATTTATTCGTTGTTCTCATGTGTTTTTATTCTTCTATGTCATTAGCGATTGAGCTGACAGAGAA
AGAACGCCAATGGCTTAAAAACAATCAAGAGTTCACCTTTTTTAACGATGACTATGACTCAAGGCTGTTTTTTATCGAGA
ATGAGGTTCAAAAAGGACTTTATTTCGATCTGCTTCAAGACATCAATAAAAAACTAAATACGAACTTTAAAATACAAGTC
GAGAAGATTGACGATCTAATTAAAAAATTTAATAAGGTTGAAACGGGAGCTTATTTTGATTTTGCGAAAACAAAGGAAAG
AAGTGAACATTATAATTTTGTCCCCACGTTATATCGTGTAAATACCAAGGTTTATTATAACGACGCGGCTAAGATCCCCG
ACCTTGTTAGTTTAAATAATAAAAGAGTGGGGTTAATTGAAGAGTGGTATTCAACCACCAACTTTGTTCATCAGTATGTG
AATGATATTAATTATATTCCGGTTCGTTTTTCTAACCTGAATGAGGCAGTTGCCGCACTTAATGTCGGGGAAATTGATGC
CTTTATTGCAGATACGCAAGTCAGTGGACATAAGTCATTTTTAACACATAAACTGCCAAGGTTAGATCACTTATACACGT
CATTTGCGACGACAAAAGATCACCCTGAAATACACAATATACTTATTAAATATTTCAATAATTTAAGCGCACTAGAAGTA
CAAGCATTGGTAAAAAAAGCACGTGAAGACTATTTTATTTATGCGTTTAAGAATAATAAAAGTTTGCAGGGCATTAATGC
GACGGTGGGTTATGGGTTTGATGAATTTCCTGCCAGCTACATTGTTGGTGATAAGTATCAAGGTATTGCGCCTGTGCTTT
TTGACAGCATAAAAACCATCTTCAAAGATTCGGTGACTTTTTCTGAACCGAAGGCGGGAGTATGTCTCGAATACGATGTG
TTGCTGTCGACGTTTGTGAATGAGTGCATTACTGATAATTATTATCTGACGAAGTCTTACTATAGTTTTGAATTGTCGGT
ATTTAACAAGTTAGAAGGCAGTTTTATTTCAACGATTTCTGATGTAAATTATTCTCGATTAGGCATATTAAAAAACGCGC
ATTATTACGAATACGTCAAAAACAATACGTCGAACGTTACAATGGTATTTTTCGACACATTTGAAGAGATTGTTAAAGCG
ATTGATGATGGAAGAATAGACTACGCCTTTGGCGATCAGCGTTTATTATTAAACCATACCATTAATGATGACATGTATGA
TCTAAAAACGGCGGGCACATTACCTGAAACCATTTCAGTGTATATCGCGGTAAAAAAAGACAAAAAAGCGTTATACGATG
CCATTAATCTTATTTCAATCAGTTCGGATAATGAGCGATTGATTAAGAACGACTACATTAATGAAAACAAGAAGTACAAG
CACAATGACTTCTGGTTATTAGTGGGGATCTTAATCGTCAGTTTGTTGATGATAGTGGTTCTAATTACTCGTATCTTTAT
GGCGAAAAGAGCGGAACTCAAGCTACTTACCATGAATGAATCTTTGATCGGTTCATTAGAAATGGCGTCGCTATACAGTG
ATGAAGAAACCAGTGAACATAACAAACGTATTAATATATATTCTGGACATTTATCAAATTTATTAGGAATGCCAAAGCCA
TTTGTTAAAGATATTCAAATGATTGCGTCACTGCACGACATTGGGAAAATCGGTATTCCTCATTACATTTTGAAAAAGCC
GGGGAAACTTGATCCTGCTGAATTCGATGTGATGAAACAACATGTCAATATTGGTTATGACATTATCAAAAATACAGAGT
TGAGCGAACTGACTAAAAATATAGTGCTTTACCATCATGAAAAATGGAACGGAAAAGGGTACTTAAACTTAGTGGGTGAG
GCGATACCGATTGAAGCCAGAATTGTAAGTATTGTGGATGTGTATGATGCACTGAGACAAAAGCGGGTTTACAAAGAAGG
GTTTAGTCATGAAGTCTCTATTCAGATCATTGAAGATGAACTCGGTGTTTCTTTTGATCCGACCATCGCGGCGTTATTCT
TAAAACATCATGAAGATTTCAGATCTATTTTTGAAAATAACCAAACGCACGTACCAAGAATACCTCTTAAATAG

Upstream 100 bases:

>100_bases
CTGAAGCGCGTCGATATTTAGAAAAAGTATTGGCGTTTCAAAGAGAATTTAATGAGAAAGCATAGCGCTCAATCTTCGTT
ACTATTGATAATTAATTGGT

Downstream 100 bases:

>100_bases
AGTGTGAGTGCTTATTTTTTAGGGACGAGTAAGAGATTGTCGTCCTTACTCGTCCTTACTTTTCCTAGAGCTTAGCCCCT
CAATACTAGTCCCTAAGCGC

Product: metal dependent phosphohydrolases

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MYKLKYLFVVLMCFYSSMSLAIELTEKERQWLKNNQEFTFFNDDYDSRLFFIENEVQKGLYFDLLQDINKKLNTNFKIQV
EKIDDLIKKFNKVETGAYFDFAKTKERSEHYNFVPTLYRVNTKVYYNDAAKIPDLVSLNNKRVGLIEEWYSTTNFVHQYV
NDINYIPVRFSNLNEAVAALNVGEIDAFIADTQVSGHKSFLTHKLPRLDHLYTSFATTKDHPEIHNILIKYFNNLSALEV
QALVKKAREDYFIYAFKNNKSLQGINATVGYGFDEFPASYIVGDKYQGIAPVLFDSIKTIFKDSVTFSEPKAGVCLEYDV
LLSTFVNECITDNYYLTKSYYSFELSVFNKLEGSFISTISDVNYSRLGILKNAHYYEYVKNNTSNVTMVFFDTFEEIVKA
IDDGRIDYAFGDQRLLLNHTINDDMYDLKTAGTLPETISVYIAVKKDKKALYDAINLISISSDNERLIKNDYINENKKYK
HNDFWLLVGILIVSLLMIVVLITRIFMAKRAELKLLTMNESLIGSLEMASLYSDEETSEHNKRINIYSGHLSNLLGMPKP
FVKDIQMIASLHDIGKIGIPHYILKKPGKLDPAEFDVMKQHVNIGYDIIKNTELSELTKNIVLYHHEKWNGKGYLNLVGE
AIPIEARIVSIVDVYDALRQKRVYKEGFSHEVSIQIIEDELGVSFDPTIAALFLKHHEDFRSIFENNQTHVPRIPLK

Sequences:

>Translated_717_residues
MYKLKYLFVVLMCFYSSMSLAIELTEKERQWLKNNQEFTFFNDDYDSRLFFIENEVQKGLYFDLLQDINKKLNTNFKIQV
EKIDDLIKKFNKVETGAYFDFAKTKERSEHYNFVPTLYRVNTKVYYNDAAKIPDLVSLNNKRVGLIEEWYSTTNFVHQYV
NDINYIPVRFSNLNEAVAALNVGEIDAFIADTQVSGHKSFLTHKLPRLDHLYTSFATTKDHPEIHNILIKYFNNLSALEV
QALVKKAREDYFIYAFKNNKSLQGINATVGYGFDEFPASYIVGDKYQGIAPVLFDSIKTIFKDSVTFSEPKAGVCLEYDV
LLSTFVNECITDNYYLTKSYYSFELSVFNKLEGSFISTISDVNYSRLGILKNAHYYEYVKNNTSNVTMVFFDTFEEIVKA
IDDGRIDYAFGDQRLLLNHTINDDMYDLKTAGTLPETISVYIAVKKDKKALYDAINLISISSDNERLIKNDYINENKKYK
HNDFWLLVGILIVSLLMIVVLITRIFMAKRAELKLLTMNESLIGSLEMASLYSDEETSEHNKRINIYSGHLSNLLGMPKP
FVKDIQMIASLHDIGKIGIPHYILKKPGKLDPAEFDVMKQHVNIGYDIIKNTELSELTKNIVLYHHEKWNGKGYLNLVGE
AIPIEARIVSIVDVYDALRQKRVYKEGFSHEVSIQIIEDELGVSFDPTIAALFLKHHEDFRSIFENNQTHVPRIPLK
>Mature_717_residues
MYKLKYLFVVLMCFYSSMSLAIELTEKERQWLKNNQEFTFFNDDYDSRLFFIENEVQKGLYFDLLQDINKKLNTNFKIQV
EKIDDLIKKFNKVETGAYFDFAKTKERSEHYNFVPTLYRVNTKVYYNDAAKIPDLVSLNNKRVGLIEEWYSTTNFVHQYV
NDINYIPVRFSNLNEAVAALNVGEIDAFIADTQVSGHKSFLTHKLPRLDHLYTSFATTKDHPEIHNILIKYFNNLSALEV
QALVKKAREDYFIYAFKNNKSLQGINATVGYGFDEFPASYIVGDKYQGIAPVLFDSIKTIFKDSVTFSEPKAGVCLEYDV
LLSTFVNECITDNYYLTKSYYSFELSVFNKLEGSFISTISDVNYSRLGILKNAHYYEYVKNNTSNVTMVFFDTFEEIVKA
IDDGRIDYAFGDQRLLLNHTINDDMYDLKTAGTLPETISVYIAVKKDKKALYDAINLISISSDNERLIKNDYINENKKYK
HNDFWLLVGILIVSLLMIVVLITRIFMAKRAELKLLTMNESLIGSLEMASLYSDEETSEHNKRINIYSGHLSNLLGMPKP
FVKDIQMIASLHDIGKIGIPHYILKKPGKLDPAEFDVMKQHVNIGYDIIKNTELSELTKNIVLYHHEKWNGKGYLNLVGE
AIPIEARIVSIVDVYDALRQKRVYKEGFSHEVSIQIIEDELGVSFDPTIAALFLKHHEDFRSIFENNQTHVPRIPLK

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 82942; Mature: 82942

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLKYLFVVLMCFYSSMSLAIELTEKERQWLKNNQEFTFFNDDYDSRLFFIENEVQKGL
CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCEEEECCCCCCEEEEEECHHHCCH
YFDLLQDINKKLNTNFKIQVEKIDDLIKKFNKVETGAYFDFAKTKERSEHYNFVPTLYRV
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCEECHHHHHHHCCCCCCCCEEEEE
NTKVYYNDAAKIPDLVSLNNKRVGLIEEWYSTTNFVHQYVNDINYIPVRFSNLNEAVAAL
EEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHC
NVGEIDAFIADTQVSGHKSFLTHKLPRLDHLYTSFATTKDHPEIHNILIKYFNNLSALEV
CCCCHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
QALVKKAREDYFIYAFKNNKSLQGINATVGYGFDEFPASYIVGDKYQGIAPVLFDSIKTI
HHHHHHCCCCEEEEEEECCCCCCCCCEEECCCHHHCCCCEEECCCCCCCHHHHHHHHHHH
FKDSVTFSEPKAGVCLEYDVLLSTFVNECITDNYYLTKSYYSFELSVFNKLEGSFISTIS
HHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEEEEEEEHHHHCCCHHHHHHH
DVNYSRLGILKNAHYYEYVKNNTSNVTMVFFDTFEEIVKAIDDGRIDYAFGDQRLLLNHT
CCCCHHHHEEECCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCEEEEEEC
INDDMYDLKTAGTLPETISVYIAVKKDKKALYDAINLISISSDNERLIKNDYINENKKYK
CCCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCEE
HNDFWLLVGILIVSLLMIVVLITRIFMAKRAELKLLTMNESLIGSLEMASLYSDEETSEH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHCCCCCCCC
NKRINIYSGHLSNLLGMPKPFVKDIQMIASLHDIGKIGIPHYILKKPGKLDPAEFDVMKQ
CCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
HVNIGYDIIKNTELSELTKNIVLYHHEKWNGKGYLNLVGEAIPIEARIVSIVDVYDALRQ
HHCCCHHHHCCCCHHHHHCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
KRVYKEGFSHEVSIQIIEDELGVSFDPTIAALFLKHHEDFRSIFENNQTHVPRIPLK
HHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYKLKYLFVVLMCFYSSMSLAIELTEKERQWLKNNQEFTFFNDDYDSRLFFIENEVQKGL
CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCEEEECCCCCCEEEEEECHHHCCH
YFDLLQDINKKLNTNFKIQVEKIDDLIKKFNKVETGAYFDFAKTKERSEHYNFVPTLYRV
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCEECHHHHHHHCCCCCCCCEEEEE
NTKVYYNDAAKIPDLVSLNNKRVGLIEEWYSTTNFVHQYVNDINYIPVRFSNLNEAVAAL
EEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHC
NVGEIDAFIADTQVSGHKSFLTHKLPRLDHLYTSFATTKDHPEIHNILIKYFNNLSALEV
CCCCHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
QALVKKAREDYFIYAFKNNKSLQGINATVGYGFDEFPASYIVGDKYQGIAPVLFDSIKTI
HHHHHHCCCCEEEEEEECCCCCCCCCEEECCCHHHCCCCEEECCCCCCCHHHHHHHHHHH
FKDSVTFSEPKAGVCLEYDVLLSTFVNECITDNYYLTKSYYSFELSVFNKLEGSFISTIS
HHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEEEEEEEHHHHCCCHHHHHHH
DVNYSRLGILKNAHYYEYVKNNTSNVTMVFFDTFEEIVKAIDDGRIDYAFGDQRLLLNHT
CCCCHHHHEEECCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCEEEEEEC
INDDMYDLKTAGTLPETISVYIAVKKDKKALYDAINLISISSDNERLIKNDYINENKKYK
CCCCCHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCEE
HNDFWLLVGILIVSLLMIVVLITRIFMAKRAELKLLTMNESLIGSLEMASLYSDEETSEH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHCCCCCCCC
NKRINIYSGHLSNLLGMPKPFVKDIQMIASLHDIGKIGIPHYILKKPGKLDPAEFDVMKQ
CCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
HVNIGYDIIKNTELSELTKNIVLYHHEKWNGKGYLNLVGEAIPIEARIVSIVDVYDALRQ
HHCCCHHHHCCCCHHHHHCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
KRVYKEGFSHEVSIQIIEDELGVSFDPTIAALFLKHHEDFRSIFENNQTHVPRIPLK
HHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]