Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694966

Identifier: 209694966

GI number: 209694966

Start: 1566536

End: 1567543

Strand: Direct

Name: 209694966

Synonym: VSAL_I1449

Alternate gene names: NA

Gene position: 1566536-1567543 (Clockwise)

Preceding gene: 209694964

Following gene: 209694967

Centisome position: 47.11

GC content: 41.67

Gene sequence:

>1008_bases
GTGGAACTAAAGACAGAAAGCGTTTGGCCACTGCAATTTGAAGTGATTGAAGAAATAAAGCAAGTAGGCCGTTGGAGTGC
CCCTTCTTGGCATATTGGTGATGTACGCCTGTATGAAAAAGTGGCCGTCGCAACACAAAGTAACGGGATGTTATTTGAGC
GTGAGCTAGAGATTTTTTTAGATGAAAGAACCGATTATCGTTTCAATCTAAGTTCTCAAAGTCCTAAGTTATTTTTTGCG
TTTGAAAATGACAACGACGTACTTACGCCAGTAATGATCACCGCGTCACAAAGCATGATAGGGCAATACATGGATGGCGA
TTATGTTGTGTTGTCTATCGATATGCCATTACCGATGCAAGCGTGGCTAGAAGCGTTCATTGGCAAGCATGGTGAACTTA
TCGAAATTCGTAGAAAAAACGTAAAGGTGCGGGGCGCGCAAGTGAGCAACTTCCTAAGTAGATGGTCATTAAGAAAGAGA
AAAGTTCAACAAGGTGAAGAGGTTAGCGATGAGCAATCGGTTGAGATTATTGCCGATACAAATCTTGTTGAGAATGATGA
TGCGGTTGAGAACCGAGCAGAAAATGCGTCGTCTGAGTCTTTAATAGAAACGGCGGATAGCGCAGAAGAGCAAGTCTCTC
TGCCAACAAAAGACGATCTTGTTAGTATTAATGGCACAAGCAATGTTAGCCAATTTATGGCAACGGGTGTGGATAAAGAT
TTGAAAAAAGCCGCGTTGCGTAAGATGTTTTTGAATCCAGAATTTGCGATGGAAGATGAGCCAAATTATTCAACACCAGC
CAAATTAAACTCTGATGTCGCAGCAACATTACGAGGATGGATGGTCGAACCGGTTGAAGAGGAAGAAGACGACATTGAGC
CAGAGATCAGTGCCGAAACAGAACAAGATAATGATATTGAATCGAACGTCACTAACGAGAATGATAATGAATATCAATGC
GTTATAGACAATAAAGAGCAAGACAGTGAGACAAAAAAGACCACTTAA

Upstream 100 bases:

>100_bases
TATACCATAGAGATAAATCAAAAAGAAAGCGCTGTTGGTATAAGGATTGCTTTATATCATGTATAGCGATAAAAAAGCCT
CATAAAAAGAAGGGTAACTT

Downstream 100 bases:

>100_bases
TTAATCGGGACATTTTGAACCAAAGTGAGACAAAATGTCCCGACACACTTTTCATCCTTTCTAAATACCTTCAAAAATAC
CTCTATTTCAGTTATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MELKTESVWPLQFEVIEEIKQVGRWSAPSWHIGDVRLYEKVAVATQSNGMLFERELEIFLDERTDYRFNLSSQSPKLFFA
FENDNDVLTPVMITASQSMIGQYMDGDYVVLSIDMPLPMQAWLEAFIGKHGELIEIRRKNVKVRGAQVSNFLSRWSLRKR
KVQQGEEVSDEQSVEIIADTNLVENDDAVENRAENASSESLIETADSAEEQVSLPTKDDLVSINGTSNVSQFMATGVDKD
LKKAALRKMFLNPEFAMEDEPNYSTPAKLNSDVAATLRGWMVEPVEEEEDDIEPEISAETEQDNDIESNVTNENDNEYQC
VIDNKEQDSETKKTT

Sequences:

>Translated_335_residues
MELKTESVWPLQFEVIEEIKQVGRWSAPSWHIGDVRLYEKVAVATQSNGMLFERELEIFLDERTDYRFNLSSQSPKLFFA
FENDNDVLTPVMITASQSMIGQYMDGDYVVLSIDMPLPMQAWLEAFIGKHGELIEIRRKNVKVRGAQVSNFLSRWSLRKR
KVQQGEEVSDEQSVEIIADTNLVENDDAVENRAENASSESLIETADSAEEQVSLPTKDDLVSINGTSNVSQFMATGVDKD
LKKAALRKMFLNPEFAMEDEPNYSTPAKLNSDVAATLRGWMVEPVEEEEDDIEPEISAETEQDNDIESNVTNENDNEYQC
VIDNKEQDSETKKTT
>Mature_335_residues
MELKTESVWPLQFEVIEEIKQVGRWSAPSWHIGDVRLYEKVAVATQSNGMLFERELEIFLDERTDYRFNLSSQSPKLFFA
FENDNDVLTPVMITASQSMIGQYMDGDYVVLSIDMPLPMQAWLEAFIGKHGELIEIRRKNVKVRGAQVSNFLSRWSLRKR
KVQQGEEVSDEQSVEIIADTNLVENDDAVENRAENASSESLIETADSAEEQVSLPTKDDLVSINGTSNVSQFMATGVDKD
LKKAALRKMFLNPEFAMEDEPNYSTPAKLNSDVAATLRGWMVEPVEEEEDDIEPEISAETEQDNDIESNVTNENDNEYQC
VIDNKEQDSETKKTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38057; Mature: 38057

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKTESVWPLQFEVIEEIKQVGRWSAPSWHIGDVRLYEKVAVATQSNGMLFERELEIFL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHEEEEECCCCEEEEEEEEEEE
DERTDYRFNLSSQSPKLFFAFENDNDVLTPVMITASQSMIGQYMDGDYVVLSIDMPLPMQ
ECCCCEEEEECCCCCEEEEEEECCCCEECEEEEECCHHHHHHHCCCCEEEEEECCCCCHH
AWLEAFIGKHGELIEIRRKNVKVRGAQVSNFLSRWSLRKRKVQQGEEVSDEQSVEIIADT
HHHHHHHCCCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
NLVENDDAVENRAENASSESLIETADSAEEQVSLPTKDDLVSINGTSNVSQFMATGVDKD
CCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCHH
LKKAALRKMFLNPEFAMEDEPNYSTPAKLNSDVAATLRGWMVEPVEEEEDDIEPEISAET
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EQDNDIESNVTNENDNEYQCVIDNKEQDSETKKTT
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHCCCC
>Mature Secondary Structure
MELKTESVWPLQFEVIEEIKQVGRWSAPSWHIGDVRLYEKVAVATQSNGMLFERELEIFL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHEEEEECCCCEEEEEEEEEEE
DERTDYRFNLSSQSPKLFFAFENDNDVLTPVMITASQSMIGQYMDGDYVVLSIDMPLPMQ
ECCCCEEEEECCCCCEEEEEEECCCCEECEEEEECCHHHHHHHCCCCEEEEEECCCCCHH
AWLEAFIGKHGELIEIRRKNVKVRGAQVSNFLSRWSLRKRKVQQGEEVSDEQSVEIIADT
HHHHHHHCCCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
NLVENDDAVENRAENASSESLIETADSAEEQVSLPTKDDLVSINGTSNVSQFMATGVDKD
CCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCHH
LKKAALRKMFLNPEFAMEDEPNYSTPAKLNSDVAATLRGWMVEPVEEEEDDIEPEISAET
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EQDNDIESNVTNENDNEYQCVIDNKEQDSETKKTT
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA