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The map label for this gene is 209694954

Identifier: 209694954

GI number: 209694954

Start: 1550006

End: 1550791

Strand: Direct

Name: 209694954

Synonym: VSAL_I1435

Alternate gene names: NA

Gene position: 1550006-1550791 (Clockwise)

Preceding gene: 209694953

Following gene: 209694955

Centisome position: 46.61

GC content: 43.13

Gene sequence:

>786_bases
ATGGATAAGGATTTATCACTCGATAATTTACGTAAAAAAATCAGAAGTAATGAGTTCACAAAAGCGACTTCAGGCTATGC
TCCGGGTTATTTACAAGCCAATCTCGTTATTTTACCGGCTCTTTGGGCGACTGATTTCTTACTTTTTTGTCAGAAAAATC
CTGTGGCATGCCCATTGATCGACGTCACTCAACCAGGAGAGAGATACCTTCCTTCCATTGGTGCTGATATTGATTTGTCG
AGGGACGTTCCCGAATATCATGTGTTCTATGAGGGTAATTTTGAAGCCTCAGTGCCCGATCTTACCGAACTGTGGCAAGA
CGATTTAGTGACGTTTGTTCTTGGTTGTTCTTTCTCGTTTGAAGAAGCCCTAATCCAATCAGGTTTGTCTATTCGAAATA
TTGATGATGGAAAAAATGTCTCCATGTATGACACAAACATAGCTTGCCAACCCGCAGGGAAGTTTGACGGAAACTTTGTG
GTTTCTATGCGCCCATTTACACCAAAGGATGCAATTCGTGCGATTCAAATAACGACTCGATTCCCTAAATCCCATGGCGC
ACCAGTGCATTTTGGTGATCCTAGCGTGATTGGCATTTCAGACATCGCTAAACCAAATTATGGAGAGGCGGTTCATATCA
ATTCAGATGAAATTCCTGTGTTTTGGGCATGTGGTGTCACACCGCAAAATGTGATCCGCCAAAGTCGTCCTCCTTTCTGT
ATTACCCATGCTCCAGGAAAAATGTTGATCACCGACCGCTTAAGTTCTGAGTTTGCCGTGCTCTAG

Upstream 100 bases:

>100_bases
TATCAAGAATAGCAGAAAAATACGAATAGACATTATTAAAATAAGCAGTAATGTAACTCCTGATTAACGATAACATTACA
ATCATCAAAGGGAGAACATG

Downstream 100 bases:

>100_bases
TTATTCAGGGTTGCCATCACTGTGCTGTTACCAAACAACGAGCCAATAATTAAGGAAATGGAATGAAGATTAATTGTGAT
ATGGGTGAAAGTTTTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATDFLLFCQKNPVACPLIDVTQPGERYLPSIGADIDLS
RDVPEYHVFYEGNFEASVPDLTELWQDDLVTFVLGCSFSFEEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFV
VSMRPFTPKDAIRAIQITTRFPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFWACGVTPQNVIRQSRPPFC
ITHAPGKMLITDRLSSEFAVL

Sequences:

>Translated_261_residues
MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATDFLLFCQKNPVACPLIDVTQPGERYLPSIGADIDLS
RDVPEYHVFYEGNFEASVPDLTELWQDDLVTFVLGCSFSFEEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFV
VSMRPFTPKDAIRAIQITTRFPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFWACGVTPQNVIRQSRPPFC
ITHAPGKMLITDRLSSEFAVL
>Mature_261_residues
MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATDFLLFCQKNPVACPLIDVTQPGERYLPSIGADIDLS
RDVPEYHVFYEGNFEASVPDLTELWQDDLVTFVLGCSFSFEEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFV
VSMRPFTPKDAIRAIQITTRFPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFWACGVTPQNVIRQSRPPFC
ITHAPGKMLITDRLSSEFAVL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=235, Percent_Identity=33.1914893617021, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI156139133, Length=235, Percent_Identity=32.7659574468085, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI156139131, Length=235, Percent_Identity=32.7659574468085, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI156139129, Length=235, Percent_Identity=32.7659574468085, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI156139137, Length=234, Percent_Identity=31.1965811965812, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1435_ALISL (B6EKU7)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262883.1
- ProteinModelPortal:   B6EKU7
- GeneID:   6987090
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I1435
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28874; Mature: 28874

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATDFLLFCQKNPVACPLI
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECEEEEEHHHHHCEEEEECCCCCCCEEE
DVTQPGERYLPSIGADIDLSRDVPEYHVFYEGNFEASVPDLTELWQDDLVTFVLGCSFSF
ECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
EEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFVVSMRPFTPKDAIRAIQITTR
HHHHHHCCCEEEECCCCCCEEEEECCEEECCCCCCCCEEEEEECCCCCHHHEEEEEEEEE
FPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFWACGVTPQNVIRQSRPPFC
CCCCCCCEEEECCCCEEEHHHCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHCCCCCEE
ITHAPGKMLITDRLSSEFAVL
EEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATDFLLFCQKNPVACPLI
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECEEEEEHHHHHCEEEEECCCCCCCEEE
DVTQPGERYLPSIGADIDLSRDVPEYHVFYEGNFEASVPDLTELWQDDLVTFVLGCSFSF
ECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
EEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFVVSMRPFTPKDAIRAIQITTR
HHHHHHCCCEEEECCCCCCEEEEECCEEECCCCCCCCEEEEEECCCCCHHHEEEEEEEEE
FPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFWACGVTPQNVIRQSRPPFC
CCCCCCCEEEECCCCEEEHHHCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHCCCCCEE
ITHAPGKMLITDRLSSEFAVL
EEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA