The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694952

Identifier: 209694952

GI number: 209694952

Start: 1545349

End: 1545699

Strand: Direct

Name: 209694952

Synonym: VSAL_I1432

Alternate gene names: NA

Gene position: 1545349-1545699 (Clockwise)

Preceding gene: 209694951

Following gene: 209694953

Centisome position: 46.47

GC content: 38.46

Gene sequence:

>351_bases
ATGGAAATGATCATAGTCTCTTCTGAAAGACAAAAACGTTTAATCATGATATTTGCTCGTATGAAAGCAAAAATGTCAGA
TAAAGCACTCTTGAAAAATTTAGATGCATACGACATTAACTCAACGGCTTATGCTGCTTTTAAAAAAGCATCAGATCTTC
ATATTGAGCGTATTCATTTACCGTTTGGTGATGACAGAACAGGCTCACTAGATGGTGGCGATTTCCTATTCCGTTATCTT
TCTAAAGGTTATATTTGCCTTGGTGATTTCGAAGGCCAACCAAAACCAGATTTAGCACCATGGGGTGTTCGTTCAGTTCG
CCGTCAACCTAAGATCGGTTTCGGACTGTAA

Upstream 100 bases:

>100_bases
CGCTGTGTAATTAAGCAGTTGTCTGTAGCGATATAAAGTGAATATAGAAGTAGGCTGAGGCTTACTATATAATTCCTTTT
TTTTGAAAGGAGTTCCTATA

Downstream 100 bases:

>100_bases
TAGATTTAAACTATCGATTGTATAATAGTTATAGCTGCATCGTAATACCCGTGAGCTAATCAGAATTAAATTGCAATGGG
AGTATTCTATAAAATTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYAAFKKASDLHIERIHLPFGDDRTGSLDGGDFLFRYL
SKGYICLGDFEGQPKPDLAPWGVRSVRRQPKIGFGL

Sequences:

>Translated_116_residues
MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYAAFKKASDLHIERIHLPFGDDRTGSLDGGDFLFRYL
SKGYICLGDFEGQPKPDLAPWGVRSVRRQPKIGFGL
>Mature_116_residues
MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYAAFKKASDLHIERIHLPFGDDRTGSLDGGDFLFRYL
SKGYICLGDFEGQPKPDLAPWGVRSVRRQPKIGFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13157; Mature: 13157

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYAAFKKASDLHIERIHL
CEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEC
PFGDDRTGSLDGGDFLFRYLSKGYICLGDFEGQPKPDLAPWGVRSVRRQPKIGFGL
CCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYAAFKKASDLHIERIHL
CEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEC
PFGDDRTGSLDGGDFLFRYLSKGYICLGDFEGQPKPDLAPWGVRSVRRQPKIGFGL
CCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA