The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694935

Identifier: 209694935

GI number: 209694935

Start: 1528916

End: 1529311

Strand: Direct

Name: 209694935

Synonym: VSAL_I1412

Alternate gene names: NA

Gene position: 1528916-1529311 (Clockwise)

Preceding gene: 209694934

Following gene: 209694936

Centisome position: 45.98

GC content: 38.64

Gene sequence:

>396_bases
ATGACGGCACTGATATCGGATAGACAGAAAAACAGTAGGGCAAAGCTATTATTATGCTTTGTTCTTTTAAGTGTATTTAT
CTGTTTTAGTCAACTTATTGGTGTAACGTCAAGCTGTCAAGAGCACCTTATTGAAGCACAAGCCAGAGTTCACCAACTGG
ACTCCACTATCGACAATGGCTCTCAAACCATTGCTGAAAAATGCGATTTAGTTGAGCATTTACTGTCATTTGATAACAGC
ATACACGATCTTCTTTTGTGTGTGTGGCTGCTGCTTGGCATCACATTACTTGTTATTCCTCTTTTATATACCTCTCTCAT
ATTTGTCGAACCAATAGAACGGCAAGTGCAAAAAATTCGACGGCGGCATCTTACATTTTGTGTTTTTCTGGAATAA

Upstream 100 bases:

>100_bases
TAAGCAGATGTTTTTTGAAAGATGAAAAAATGATGTATATCATAGTGATTCTTCATTGATCCTGTAACAATGACTATTAC
GTTTTATACCATGGATTTTG

Downstream 100 bases:

>100_bases
CCACTAAGTAAAAATGAATTAACTACTTTTATTTTACTTAGGAAACTACGATGAAAAAATTAGAAAAAGCGATCGAAGTG
ATTAAATATCTGCCGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIEAQARVHQLDSTIDNGSQTIAEKCDLVEHLLSFDNS
IHDLLLCVWLLLGITLLVIPLLYTSLIFVEPIERQVQKIRRRHLTFCVFLE

Sequences:

>Translated_131_residues
MTALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIEAQARVHQLDSTIDNGSQTIAEKCDLVEHLLSFDNS
IHDLLLCVWLLLGITLLVIPLLYTSLIFVEPIERQVQKIRRRHLTFCVFLE
>Mature_130_residues
TALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIEAQARVHQLDSTIDNGSQTIAEKCDLVEHLLSFDNSI
HDLLLCVWLLLGITLLVIPLLYTSLIFVEPIERQVQKIRRRHLTFCVFLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14966; Mature: 14835

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIEAQARVHQLDSTIDNG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
SQTIAEKCDLVEHLLSFDNSIHDLLLCVWLLLGITLLVIPLLYTSLIFVEPIERQVQKIR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHLTFCVFLE
HHHHHHHEECC
>Mature Secondary Structure 
TALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIEAQARVHQLDSTIDNG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCH
SQTIAEKCDLVEHLLSFDNSIHDLLLCVWLLLGITLLVIPLLYTSLIFVEPIERQVQKIR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHLTFCVFLE
HHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA