Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694934

Identifier: 209694934

GI number: 209694934

Start: 1528352

End: 1528810

Strand: Direct

Name: 209694934

Synonym: VSAL_I1411

Alternate gene names: NA

Gene position: 1528352-1528810 (Clockwise)

Preceding gene: 209694932

Following gene: 209694935

Centisome position: 45.96

GC content: 38.56

Gene sequence:

>459_bases
ATGCCAAATAAAGACGCTATTTTTCAACAGTTATTTCTCAGAGAGACGCAGGGAGCTCCCATTGTGGATCGTGAGTCTGT
GCCTTTGAATCATACCCATAAGCAAGATTATGAAAAATGGCTTGCAGAAAAGCGAGACTTTACGATTGAAGAGATCGACG
AATCGCATTGGATTAAATCATGTACTGCTGGTTACATTACGGAAGTGATTTTTAAAGAGAGTGGCAGCTTAACTGAGTTC
ACTCTATTTGAAAGGTTGAAAACGGTAGGGCATTGGCAATTAAAGGAAGGCTTAGTGTATGTTTCGATCTTTAAAGGTGA
GAATCAATACGATTTTGTGATTGTGGCGAACGCTAACGTACATATTCATTCCGCAATAGAATATAAAAATGACGAGATCC
ACTCTTATTTGAAGTTAGCACAAACAAGAGTGCCGTATAGATTATCGCAATCTCATTGA

Upstream 100 bases:

>100_bases
GTGGTTTTTATTTATATAATTACGCTATGATGAATTTAGAACTTGAGGGTATTAAAGCTAAGATCGTATTTTTAATGTCG
AGCTTTAAAGGAGATAAATA

Downstream 100 bases:

>100_bases
TGAACTAAGCAGATGTTTTTTGAAAGATGAAAAAATGATGTATATCATAGTGATTCTTCATTGATCCTGTAACAATGACT
ATTACGTTTTATACCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKRDFTIEEIDESHWIKSCTAGYITEVIFKESGSLTEF
TLFERLKTVGHWQLKEGLVYVSIFKGENQYDFVIVANANVHIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH

Sequences:

>Translated_152_residues
MPNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKRDFTIEEIDESHWIKSCTAGYITEVIFKESGSLTEF
TLFERLKTVGHWQLKEGLVYVSIFKGENQYDFVIVANANVHIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH
>Mature_151_residues
PNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKRDFTIEEIDESHWIKSCTAGYITEVIFKESGSLTEFT
LFERLKTVGHWQLKEGLVYVSIFKGENQYDFVIVANANVHIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17814; Mature: 17683

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKRDFTIEEIDESHWIKS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCHHHHHHH
CTAGYITEVIFKESGSLTEFTLFERLKTVGHWQLKEGLVYVSIFKGENQYDFVIVANANV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCEEEEEEEECCE
HIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH
EEEEEEECCCHHHHHHHHHHHHCCCEEECCCC
>Mature Secondary Structure 
PNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKRDFTIEEIDESHWIKS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCHHHHHHH
CTAGYITEVIFKESGSLTEFTLFERLKTVGHWQLKEGLVYVSIFKGENQYDFVIVANANV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCEEEEEEEECCE
HIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH
EEEEEEECCCHHHHHHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA