Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yggL [C]
Identifier: 209694835
GI number: 209694835
Start: 1413481
End: 1413819
Strand: Direct
Name: yggL [C]
Synonym: VSAL_I1301
Alternate gene names: 209694835
Gene position: 1413481-1413819 (Clockwise)
Preceding gene: 209694834
Following gene: 209694840
Centisome position: 42.51
GC content: 34.81
Gene sequence:
>339_bases ATGAAAGTTAAAAAGTTAGAAAACAAAAATCGTCGTATTCGTAAGAAACTTTACTTAGGTGAGTTTGCGATTCTTGGTTT TGAACTAAGCTGTAAGACTGAGTTTAAAGACTTTGATCAGTATGATGTATTCGTCGATGAATTTATTGATTACATCAACA GCATTGATTTATGTTTTTGTGGTGGTGGCCTTGAGTTATTTGAAGGTTTTGTTTGTTCAACTGAGCGTTATGACTCAGCA ACGGCTGAACAACAACTATTAGTTGCTAACTGGTTGGACAGTCGTCCTGAAGTTAGTAAAGTTGAGATCAGTGAACTGGT TGATACAAACTACTTATAA
Upstream 100 bases:
>100_bases ATTTTTGTATTTGAATTTCTTGATTTCTTTCAATCAAAGCTTGGGAAAAGTGATGGAAAGGAGTATAAATAGAGGTAGAT AAATCAAAGAGAGAAATGCC
Downstream 100 bases:
>100_bases GCCTTTATTTCTGTATTTAGGTTTAATAAAAATCCGCCTTAGATAGGCGGATTTTTTATGTTCTAAATATAGTTATTGCG TTGCTACTTTTTGATACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA TAEQQLLVANWLDSRPEVSKVEISELVDTNYL
Sequences:
>Translated_112_residues MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA TAEQQLLVANWLDSRPEVSKVEISELVDTNYL >Mature_112_residues MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA TAEQQLLVANWLDSRPEVSKVEISELVDTNYL
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082190, Length=106, Percent_Identity=36.7924528301887, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13044; Mature: 13044
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFC CCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE GGGLELFEGFVCSTERYDSATAEQQLLVANWLDSRPEVSKVEISELVDTNYL CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFC CCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE GGGLELFEGFVCSTERYDSATAEQQLLVANWLDSRPEVSKVEISELVDTNYL CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA