The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is yggL [C]

Identifier: 209694835

GI number: 209694835

Start: 1413481

End: 1413819

Strand: Direct

Name: yggL [C]

Synonym: VSAL_I1301

Alternate gene names: 209694835

Gene position: 1413481-1413819 (Clockwise)

Preceding gene: 209694834

Following gene: 209694840

Centisome position: 42.51

GC content: 34.81

Gene sequence:

>339_bases
ATGAAAGTTAAAAAGTTAGAAAACAAAAATCGTCGTATTCGTAAGAAACTTTACTTAGGTGAGTTTGCGATTCTTGGTTT
TGAACTAAGCTGTAAGACTGAGTTTAAAGACTTTGATCAGTATGATGTATTCGTCGATGAATTTATTGATTACATCAACA
GCATTGATTTATGTTTTTGTGGTGGTGGCCTTGAGTTATTTGAAGGTTTTGTTTGTTCAACTGAGCGTTATGACTCAGCA
ACGGCTGAACAACAACTATTAGTTGCTAACTGGTTGGACAGTCGTCCTGAAGTTAGTAAAGTTGAGATCAGTGAACTGGT
TGATACAAACTACTTATAA

Upstream 100 bases:

>100_bases
ATTTTTGTATTTGAATTTCTTGATTTCTTTCAATCAAAGCTTGGGAAAAGTGATGGAAAGGAGTATAAATAGAGGTAGAT
AAATCAAAGAGAGAAATGCC

Downstream 100 bases:

>100_bases
GCCTTTATTTCTGTATTTAGGTTTAATAAAAATCCGCCTTAGATAGGCGGATTTTTTATGTTCTAAATATAGTTATTGCG
TTGCTACTTTTTGATACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA
TAEQQLLVANWLDSRPEVSKVEISELVDTNYL

Sequences:

>Translated_112_residues
MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA
TAEQQLLVANWLDSRPEVSKVEISELVDTNYL
>Mature_112_residues
MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSA
TAEQQLLVANWLDSRPEVSKVEISELVDTNYL

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082190, Length=106, Percent_Identity=36.7924528301887, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13044; Mature: 13044

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFC
CCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
GGGLELFEGFVCSTERYDSATAEQQLLVANWLDSRPEVSKVEISELVDTNYL
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFVDEFIDYINSIDLCFC
CCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
GGGLELFEGFVCSTERYDSATAEQQLLVANWLDSRPEVSKVEISELVDTNYL
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA