Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yeiG [H]
Identifier: 209694333
GI number: 209694333
Start: 831701
End: 832543
Strand: Reverse
Name: yeiG [H]
Synonym: VSAL_I0745
Alternate gene names: 209694333
Gene position: 832543-831701 (Counterclockwise)
Preceding gene: 209694334
Following gene: 209694332
Centisome position: 25.04
GC content: 39.74
Gene sequence:
>843_bases ATGACAGTTGAAAACATTAGCCAAGCCAAAGTTGCCGGTGGTTGGCACAAACAATATACACATACATCATCCACACTAAA TTGCGATATGCGCTTTGCTATCTTCCTACCAGCCAACGCCTCTGAAAGTAATCCGGTTCCTGTTTTATACTGGTTATCAG GCTTAACGTGTACTGATGAAAACTTCATGCAAAAAGCGGGCGCTTTCAAAAAAGCAGCTGAATTAGGCATTGCAATTGTC GCTATGGATACAAGCCCACGTGGTGAAGATGTTGATGATGATGCAGAAGGTGCCTACGATTTTGGTCTAGGTGCTGGATT CTACTTAAATGCAACTCAAGCGCCATGGAATCGTCATTACCATATGTATGATTACGTAACAAAAGAGCTGCCATCTTTAA TTGAAGAGCACTTCCCTGTATCAGATAAAAAATCGATTTCTGGTCACAGCATGGGTGGTCATGGTGCAATTACCATTGGC TTGAAAAACCAAGATGCATATCAGTCTATTTCTGCATTTAGTCCAATATCTAGCCCAATCAATTGCCCTTGGGGTCAAAA AGCATTAGGTCTATATCTTGGTGATAATAAAGAAACTTGGAAAGAGTACGACAGCTCTGAGCTTCTTAAAAAAGGGTCTA AACTTCCAATTTTAGTTGACCAAGGTGAAGCTGATGGCTTCTTAGAAGAACAATTAAAACCTGAGTACCTACTTTCTTCA GCAGAGCAATCAGGCACGAATATAGAAGTAAGAATGCAACCAGGTTACGACCACAGCTATTTCTTTATGTCGACTTTTAT TGATGAGCACCTAGAATTTCATGCTACTTATTTAAATAAATAA
Upstream 100 bases:
>100_bases TCTTTTTTCTTTACTTCAAAGCACTTTAAAATCAATCAGTAGATACCTCATTCTATGCAGTGAAATCACTGATATGAATT AAATATAATAAGGATTCATC
Downstream 100 bases:
>100_bases TACTGATTTAAGATAAGTAAAAGAATAAGTAGCAAAAATCCCAGAGTAGGTTCTCCTTCTCTGGGATTTTTTATATCTAT ATATTAATTTAATATAATTA
Product: esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIV AMDTSPRGEDVDDDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIG LKNQDAYQSISAFSPISSPINCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS AEQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK
Sequences:
>Translated_280_residues MTVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIV AMDTSPRGEDVDDDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIG LKNQDAYQSISAFSPISSPINCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS AEQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK >Mature_279_residues TVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVA MDTSPRGEDVDDDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGL KNQDAYQSISAFSPISSPINCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSSA EQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=283, Percent_Identity=49.469964664311, Blast_Score=293, Evalue=1e-79, Organism=Escherichia coli, GI1788477, Length=281, Percent_Identity=53.3807829181495, Blast_Score=306, Evalue=8e-85, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=50.7194244604317, Blast_Score=293, Evalue=7e-81, Organism=Caenorhabditis elegans, GI17510185, Length=288, Percent_Identity=50.3472222222222, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6322393, Length=293, Percent_Identity=44.0273037542662, Blast_Score=236, Evalue=3e-63, Organism=Drosophila melanogaster, GI45551932, Length=285, Percent_Identity=48.0701754385965, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24648347, Length=286, Percent_Identity=47.9020979020979, Blast_Score=272, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31092; Mature: 30961
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNPVPVLYWLSGLTCTDE CCCCCCCHHHHCCCCHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCEECCH NFMQKAGAFKKAAELGIAIVAMDTSPRGEDVDDDAEGAYDFGLGAGFYLNATQAPWNRHY HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCE HMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGLKNQDAYQSISAFSPISSPI EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC NCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS CCCCCCCEEEEEECCCHHHHHHCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHHH AEQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNPVPVLYWLSGLTCTDE CCCCCCHHHHCCCCHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCEECCH NFMQKAGAFKKAAELGIAIVAMDTSPRGEDVDDDAEGAYDFGLGAGFYLNATQAPWNRHY HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCE HMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGLKNQDAYQSISAFSPISSPI EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC NCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS CCCCCCCEEEEEECCCHHHHHHCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHHH AEQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK HHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA