| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is guaB [H]
Identifier: 209694326
GI number: 209694326
Start: 821451
End: 822914
Strand: Direct
Name: guaB [H]
Synonym: VSAL_I0737a
Alternate gene names: 209694326
Gene position: 821451-822914 (Clockwise)
Preceding gene: 209694324
Following gene: 209694327
Centisome position: 24.7
GC content: 45.15
Gene sequence:
>1464_bases ATGCTACGAATCGCAAAAGAAGCTTTAACCTTCGATGACGTTTTACTCGTCCCAGCACACTCTACTGTTCTTCCTAACAC CGCTGATATTCGCACTCAGTTAACGAAGAGCATCTCTCTAAATATCCCAATGATTTCAGCATCAATGGATACCGTGACAG AAGCGCGTCTTGCTATTGCGTTAGCGCAAGAGGGTGGCATCGGTTTTATCCACAAAAACATGTCAATTGAACAGCAAGCT GAAGAAGTTCGCTTAGTAAAAATCTTTGAAGCAGGCGTTGTCTCTGCTCCAGTAACCGTTCGTCCTGACGCAACTATTCA AGATGTGAAAGATCTGACTGAAAAACACGGTTTTGCTGGCTTCCCTGTAGTAACTGAAACTAACGAACTAGTTGGTATCA TTACTGGTCGTGATGTTCGTTTCGTAACAGACTTATCTAAGAAAGTTGACGTTGTAATGACGCCAAAATCACGCTTAGCT TCTGTTAAAGAAGGAGCAACTCGTGAAGAAGTTCAAGAGAAAATGCATGAAGCTCGCGTTGAGAAAGTATTGGTAGTGAA CGATGAGTTCCAACTAACTGGTATGATCACAGCAAAAGATTTCCATAAAGCAGAACGTAAACCGAATGCATGTAAAGACG AACGTGGTCGTCTACGTGTTGGTGCTGCTGTTGGTGCGGGTGCTGGTAACGAAGAGCGTGTTGCTGCTCTTGTTGAAGCG GGTGTTGACGTTCTACTTATCGATTCATCACACGGTCACTCAGAAGGCGTTTTACAACGTATTCGTGAAACTCGTGCTGC TTTCCCTGATCTACAAATCATTGGTGGTAACGTTGCGACTGGTTTAGGCGCTCAAGCATTAATCGATGCTGGCGTAAGTG CGGTTAAAGTCGGTATTGGCCCGGGTTCAATTTGTACTACTCGCATTGTAACTGGTGTTGGTGTTCCTCAAATTACGGCA ATTTCAGACGCAGCTGAAGTGGCAAATGCTCACGGCATTCCTGTTATTGCAGATGGCGGTATTCGTTACTCTGGTGATAT TTGTAAAGCAATCGCAGCTGGCGCATCATGCGTTATGGTTGGCTCAATGTTTGCTGGTACAGAGGAAGCTCCGGGTGAAG TCATTCTTTTCCAAGGTCGTTCATACAAATCTTACCGTGGAATGGGCTCTCTGGGTGCAATGTCTCAAGGCTCTTCAGAC CGTTACTTCCAATCCGATAATGCAGCGGACAAACTTGTCCCTGAAGGTATTGAAGGCCGCATCGCGTATCGCGGTCGTCT AAAAGAGATCGTTCACCAACAAATGGGTGGTTTACGCTCAAGCATGGGCCTAACGGGTTCTGCAACGATTGAAGACATGC GTACTAAAGCAGAATTTGTAATAATCTCAGGTGCGGGTATGAAAGAATCACACGTACATGATGTTCAGATCACAAAAGAA GCACCAAACTACCGTTTAGGTTAG
Upstream 100 bases:
>100_bases GTATAATCCGTCTGCAATATCAAATCCAAAACACTTTATTATGCGAAACGATAAAGTGGGATTTATTTCTTTTAACACCT TATGTTGTGAGATATTGCAA
Downstream 100 bases:
>100_bases AAAAAGCGCCTAGGTTAATTTTTCTTAGTTTTTGTAGAATCTTACGGTTTCGTTGTTAAAGGTACTCGTTTGCACATTGT AAATGTTGTACCTTCTCTTC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKDLTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATGLGAQALIDAGVSAVKVGIGPGSICTTRIVTGVGVPQITA ISDAAEVANAHGIPVIADGGIRYSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVIISGAGMKESHVHDVQITKE APNYRLG
Sequences:
>Translated_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKDLTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATGLGAQALIDAGVSAVKVGIGPGSICTTRIVTGVGVPQITA ISDAAEVANAHGIPVIADGGIRYSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVIISGAGMKESHVHDVQITKE APNYRLG >Mature_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKDLTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATGLGAQALIDAGVSAVKVGIGPGSICTTRIVTGVGVPQITA ISDAAEVANAHGIPVIADGGIRYSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVIISGAGMKESHVHDVQITKE APNYRLG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=463, Percent_Identity=41.2526997840173, Blast_Score=335, Evalue=6e-92, Organism=Homo sapiens, GI34328928, Length=463, Percent_Identity=41.2526997840173, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI34328930, Length=463, Percent_Identity=41.2526997840173, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI156616279, Length=463, Percent_Identity=41.2526997840173, Blast_Score=333, Evalue=2e-91, Organism=Homo sapiens, GI66933016, Length=457, Percent_Identity=40.7002188183807, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI217035152, Length=452, Percent_Identity=41.5929203539823, Blast_Score=328, Evalue=9e-90, Organism=Homo sapiens, GI217035148, Length=463, Percent_Identity=40.3887688984881, Blast_Score=323, Evalue=3e-88, Organism=Homo sapiens, GI217035150, Length=463, Percent_Identity=37.7969762419007, Blast_Score=294, Evalue=1e-79, Organism=Homo sapiens, GI156104880, Length=249, Percent_Identity=35.7429718875502, Blast_Score=158, Evalue=9e-39, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=34.0080971659919, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=34.0080971659919, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=34.0080971659919, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=34.0080971659919, Blast_Score=152, Evalue=9e-37, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=81.9301848049281, Blast_Score=756, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=219, Percent_Identity=35.1598173515982, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71994385, Length=481, Percent_Identity=37.8378378378378, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=40.2843601895735, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=35.2941176470588, Blast_Score=151, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=38.5093167701863, Blast_Score=332, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=37.888198757764, Blast_Score=327, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=38.7163561076605, Blast_Score=320, Evalue=3e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=39.9408284023669, Blast_Score=252, Evalue=9e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=101, Percent_Identity=39.6039603960396, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641071, Length=460, Percent_Identity=40.2173913043478, Blast_Score=316, Evalue=3e-86, Organism=Drosophila melanogaster, GI24641073, Length=460, Percent_Identity=40.2173913043478, Blast_Score=316, Evalue=3e-86, Organism=Drosophila melanogaster, GI28571163, Length=418, Percent_Identity=40.9090909090909, Blast_Score=283, Evalue=2e-76,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51624; Mature: 51624
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMISASMDTVTEARLAIA CCEEHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHEEECCEEEECCHHHHHHHHEEEE LAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVVSAPVTVRPDATIQDVKDLTEKHGFAG EECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC FPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLASVKEGATREEVQEKMHEARV CCEEECCCCEEEEEECCCEEEEEHHCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH EKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVAALVEA CEEEEECCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATGLGAQALIDAGVSAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEECC PGSICTTRIVTGVGVPQITAISDAAEVANAHGIPVIADGGIRYSGDICKAIAAGASCVMV CCCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHCCCCEEEE GSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE IAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVIISGAGMKESHVHDVQITKE EEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCEEEEEECC APNYRLG CCCCCCC >Mature Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMISASMDTVTEARLAIA CCEEHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHEEECCEEEECCHHHHHHHHEEEE LAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVVSAPVTVRPDATIQDVKDLTEKHGFAG EECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC FPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLASVKEGATREEVQEKMHEARV CCEEECCCCEEEEEECCCEEEEEHHCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH EKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVAALVEA CEEEEECCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATGLGAQALIDAGVSAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEECC PGSICTTRIVTGVGVPQITAISDAAEVANAHGIPVIADGGIRYSGDICKAIAAGASCVMV CCCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHCCCCEEEE GSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE IAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVIISGAGMKESHVHDVQITKE EEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCEEEEEECC APNYRLG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]