| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yfgJ [C]
Identifier: 209694324
GI number: 209694324
Start: 819669
End: 819905
Strand: Direct
Name: yfgJ [C]
Synonym: VSAL_I0735
Alternate gene names: 209694324
Gene position: 819669-819905 (Clockwise)
Preceding gene: 209694323
Following gene: 209694326
Centisome position: 24.65
GC content: 38.4
Gene sequence:
>237_bases ATGCAAGTAAATCAATGCCCAAGCTGCCAATCAGAATTACGCTGGCAGAAAGAGGGTTATCATTGTGATTTTTGTCAGGT TGATTTTAAAAAAATCGCACATTGTCCTGACTGCAATAAAGAAATGGAAAAGCTTAACGCCTGTGGTGCGGCAAATTATT TCTGCCATGAGTGTAATGAGCTGAAGTCAAAATCACGAGTAAAGACTGAGTTAGTACAATTAAGCGATAAGCTGTAA
Upstream 100 bases:
>100_bases GTTATATAAATGTTCTTAAAGGGGATGATCGCTGATCAGATCCCTATAAGCGCAAAGATCTGCATTTGTTTAAAGTGAAT AGTCGTAGAGGAAGTAAGTG
Downstream 100 bases:
>100_bases GTTACTTATCGACTGTTGATTGTACTTCACCATCAACAAAGCGGGTCGTAATGGTATCACCAGTATGAACCTGCTGAGTT GATGTTATGAGACTGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKLNACGAANYFCHECNELKSKSRVKTELVQLSDKL
Sequences:
>Translated_78_residues MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKLNACGAANYFCHECNELKSKSRVKTELVQLSDKL >Mature_78_residues MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKLNACGAANYFCHECNELKSKSRVKTELVQLSDKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9061; Mature: 9061
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 14.1 %Cys+Met (Translated Protein) 11.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 14.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKLNACGAANYFCHECNE CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH LKSKSRVKTELVQLSDKL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKLNACGAANYFCHECNE CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH LKSKSRVKTELVQLSDKL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA