Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694323

Identifier: 209694323

GI number: 209694323

Start: 818497

End: 819372

Strand: Direct

Name: 209694323

Synonym: VSAL_I0734

Alternate gene names: NA

Gene position: 818497-819372 (Clockwise)

Preceding gene: 209694322

Following gene: 209694324

Centisome position: 24.62

GC content: 37.56

Gene sequence:

>876_bases
ATGACTCAATTCTTTTCAACGGATGTTTTATTCTGTCATCAAACGTGGCAACACACCTCTGAAATTCAATTAATTAAAAA
AACAGAACAAGGCCAATGGCTTGTTGTGAAAGAAACGCCTTTTCACCCTGTTAGTCATATTTGGCCAGATCACCCAGAAG
ATAAAGGAACGATTAGTACTCGTTCAAATGAATATCCAGTACTTGCTTGTCATACTGCTGCTATTGAATTATCGACGGGT
ACTCTATATACCAATAAAGAAATACCGATTAAACGAGGTGAAGAGGGCTGGGTGTTTGTTGTTGCTCATTTAGTTGAGAG
TGCAGTGCCCGTTTCTCTTGGTGATAGCATTGAGTTAACGGTTGATGAAGAACATCAAAAAGCATTAAGCCGAGGACACA
GTGCAGGCCATATTGCCTATCTTGCATTAAATAAAGCGCTTCATGCTAAGTATTGGCGTAAAGATGCAGACAGAAAAGAT
GAATTAGGTCATTACAATTTTAATAACTACGCCCAAGTTACAAGTTTTGTAACAGAAGACAATTGTGAAGACATTTATCG
TTTAGGTAAAACACTTCGTAAGCGTGGATTAAACAGCGTTGAAATGCTAGATGATCTTTCTGCTATTGAGCATCAAATAA
ACCAACAGATTAAAGAGTGGTTATCATTAGGCAGTAAGGTAAGCATGAAGTGTGATGGTAAAGCGTTAACAGACTCACGT
TATTGGATTGCTGATTTTGGTATAGATGGTAGTGCAAAATTGCCTTGTGGTGGAACACATGTTGCTTCATTTGATGAATA
TCAAGAAATTAAGGTGCAACTACAAGTTCAAGGTGAACAAGAATTATTGATGATAACGCAGTCCATAAAGCGATAA

Upstream 100 bases:

>100_bases
ACGTAAACGTCTTGTTGGTGCTGTTAAAAACCGCAATAAAAAATAAATTCAACTAAACGATAAACGCCCAATTAATTGGG
CGTTTTTTTAGGTAAAAATC

Downstream 100 bases:

>100_bases
TAGGAATACATAAATCGAAATTACATGAAGTGTAGAGTACGCTCTGTTATTTACGTAATTAAAGGTAATTCAACTGGAAG
AGTCTTCTTGTTCTCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVSHIWPDHPEDKGTISTRSNEYPVLACHTAAIELSTG
TLYTNKEIPIKRGEEGWVFVVAHLVESAVPVSLGDSIELTVDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKD
ELGHYNFNNYAQVTSFVTEDNCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLSLGSKVSMKCDGKALTDSR
YWIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQELLMITQSIKR

Sequences:

>Translated_291_residues
MTQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVSHIWPDHPEDKGTISTRSNEYPVLACHTAAIELSTG
TLYTNKEIPIKRGEEGWVFVVAHLVESAVPVSLGDSIELTVDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKD
ELGHYNFNNYAQVTSFVTEDNCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLSLGSKVSMKCDGKALTDSR
YWIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQELLMITQSIKR
>Mature_290_residues
TQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVSHIWPDHPEDKGTISTRSNEYPVLACHTAAIELSTGT
LYTNKEIPIKRGEEGWVFVVAHLVESAVPVSLGDSIELTVDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKDE
LGHYNFNNYAQVTSFVTEDNCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLSLGSKVSMKCDGKALTDSRY
WIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQELLMITQSIKR

Specific function: Unknown

COG id: COG2872

COG function: function code R; Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33028; Mature: 32896

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVSHIWPDHPEDKGTIST
CCCEECCCEEEEEHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCEECC
RSNEYPVLACHTAAIELSTGTLYTNKEIPIKRGEEGWVFVVAHLVESAVPVSLGDSIELT
CCCCCCEEEEEEEEEEEECCEEEECCCCCCEECCCCCEEHEEHHHHHCCCCCCCCCEEEE
VDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKDELGHYNFNNYAQVTSFVTED
ECHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC
NCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLSLGSKVSMKCDGKALTDSR
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCC
YWIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQELLMITQSIKR
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
TQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVSHIWPDHPEDKGTIST
CCEECCCEEEEEHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCEECC
RSNEYPVLACHTAAIELSTGTLYTNKEIPIKRGEEGWVFVVAHLVESAVPVSLGDSIELT
CCCCCCEEEEEEEEEEEECCEEEECCCCCCEECCCCCEEHEEHHHHHCCCCCCCCCEEEE
VDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKDELGHYNFNNYAQVTSFVTED
ECHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC
NCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLSLGSKVSMKCDGKALTDSR
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCC
YWIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQELLMITQSIKR
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA