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The map label for this gene is rodZ [H]

Identifier: 209694317

GI number: 209694317

Start: 811638

End: 812528

Strand: Direct

Name: rodZ [H]

Synonym: VSAL_I0728

Alternate gene names: 209694317

Gene position: 811638-812528 (Clockwise)

Preceding gene: 209694316

Following gene: 209694318

Centisome position: 24.41

GC content: 39.73

Gene sequence:

>891_bases
ATGACTATTGAACATACAGAAGACAACATTGAAACCATTATCGCTCCAGGGCAGTTGTTAAAAAACGCTCGTGAAGCATC
AAATCTAACGTTAGAAGATATTTCAGCGCGCTTACGACTGCGTGTAGAAGTTCTCGAGCAGATAGAAGCTGATCAGTTTG
ATATGGGAAAACTTGCCACATTTACTCGTGGTTATTATCGCTCATATGCAAAAGCCGTTAATGTTCCAGAAATGGCGGTA
TTGAATGGGTTGGATATACTGGGTAAAGCGCAAATTGAAGAACACGATATGCAAAGTTTTTCTCGTAAAACAAAAAGAGA
AAAACACGATAACCGTATTATGAAGCTAACATGGGTTATTTTTGCGCTTATTCTAAGTATGTCTGTACTGTGGTGGTGGC
AAGAACAAGCTCAATTTGAAACCGCAGAGGCAACGTCTCATGTTGAAGAGATAAATAAAGAAGAAGCGGTTATTGTCGAT
GAGTTAGCTGATAGCTCAACAGAAAGTGCAGTGGCACTTGATGACGGAATTGATACATTAGAGAGTTCTGATACAGTGGC
AGCCCCTTTAGCTGAAATAACCGTTACTGATGAAGCGACTGATTCTGTTGAAACGCCGACAGTATCAGAGCAAGCACAAG
AAGCAATTATTACTGATGATGTTGTGATTACATTTAATAGTGATTGTTGGCTTCAAGTGAAAGACGCCGCAAACAATCGT
TTGTATTCAGGTGTTAAGAAATCAAATCAAACATTAAAACTAACAGGCAAAGCGCCTTATGAGTTGGTGATTGGCGCTCC
AAATGCGGTCACATTAAGCTACAAAGGCAAACCTGTTAATTTATCTGCATATCCTGCCGGTAAAGTTGCACGACTAACTT
TACCTCAATAA

Upstream 100 bases:

>100_bases
TTAGAAAAAAAAGCAGGCAATGCACATTTGGTTACTAAATATGCAAACATTTTGGGACAAAAATATCCGGACTCCAAAGA
ATATCAGACCTATATAAATC

Downstream 100 bases:

>100_bases
TGAGTTGATTCCATGCATATAGAGTCTCCAATTAAACGTCGCCAATCTACTCGCATTTATGTGGGTAATGTTCCTATTGG
TGATGGCGCACCAATCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVLEQIEADQFDMGKLATFTRGYYRSYAKAVNVPEMAV
LNGLDILGKAQIEEHDMQSFSRKTKREKHDNRIMKLTWVIFALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVD
ELADSSTESAVALDDGIDTLESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVVITFNSDCWLQVKDAANNR
LYSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNLSAYPAGKVARLTLPQ

Sequences:

>Translated_296_residues
MTIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVLEQIEADQFDMGKLATFTRGYYRSYAKAVNVPEMAV
LNGLDILGKAQIEEHDMQSFSRKTKREKHDNRIMKLTWVIFALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVD
ELADSSTESAVALDDGIDTLESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVVITFNSDCWLQVKDAANNR
LYSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNLSAYPAGKVARLTLPQ
>Mature_295_residues
TIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVLEQIEADQFDMGKLATFTRGYYRSYAKAVNVPEMAVL
NGLDILGKAQIEEHDMQSFSRKTKREKHDNRIMKLTWVIFALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVDE
LADSSTESAVALDDGIDTLESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVVITFNSDCWLQVKDAANNRL
YSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNLSAYPAGKVARLTLPQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=335, Percent_Identity=32.5373134328358, Blast_Score=164, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 32804; Mature: 32673

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVLEQIEADQFDMGKLAT
CCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FTRGYYRSYAKAVNVPEMAVLNGLDILGKAQIEEHDMQSFSRKTKREKHDNRIMKLTWVI
HHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVDELADSSTESAVALDDGIDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEECCCCHHH
ESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVVITFNSDCWLQVKDAANNR
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEECCCCEEEEECCCCCH
LYSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNLSAYPAGKVARLTLPQ
HHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCC
>Mature Secondary Structure 
TIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVLEQIEADQFDMGKLAT
CCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FTRGYYRSYAKAVNVPEMAVLNGLDILGKAQIEEHDMQSFSRKTKREKHDNRIMKLTWVI
HHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVDELADSSTESAVALDDGIDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEECCCCHHH
ESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVVITFNSDCWLQVKDAANNR
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCEEEEECCCCEEEEECCCCCH
LYSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNLSAYPAGKVARLTLPQ
HHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA