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The map label for this gene is 209694316

Identifier: 209694316

GI number: 209694316

Start: 810887

End: 811648

Strand: Direct

Name: 209694316

Synonym: VSAL_I0727

Alternate gene names: NA

Gene position: 810887-811648 (Clockwise)

Preceding gene: 209694315

Following gene: 209694317

Centisome position: 24.39

GC content: 39.37

Gene sequence:

>762_bases
ATGATAAAATGGAGTGCAGCATGGTTAGCAATTGGATTGTTAACCAGTGCCGGTTGTGTCACGGTTAATGAAGCCGATGA
GATGACCGACGATGAGATAATTCGAGCTTCCGAAGCTCGAATTACTCTCGGATTAGGTTACTTAAATGCGGGCAATATGA
TGAAGGCCCGTGAGAATTTGGAACTGGCTGCACAATATGCTCCTGACTACTACCGCTCTCAAACTTCCCTCGCTTATTAT
TATCAACAAGTAGAAGAAAATGAATTAGCTGAAAAGGCTTACAAACGAGCATTACGTTATTCATCAAAAAATGGTAATGT
ATTAAACGACTACGGGGTTTTTCTCTGTAGAAAAGGCCGTTATGAGGAAGCACAGCAAAAGTTTACTCTGGCAATTGAAC
AACCTTATTACTATTTAGTGTCAGCAAGCTATGAAAATGCAGCGATGTGCGCCCTAAGTAGTGGAGATAACGTAACAGCA
AAAACGTATTTTGAGCGTTCACTCGCTCACGATCCCCATCGAGTTCGTTCCACCCTTCAATTGGCTAAATTGAATATTGA
TGAAGGCAACTATTCAGAACCGAGGATTTCGCTGTTTAAATTTAATAAGAAGTACGGATATAAACCCGTTAGCCTAAGCT
TACTCATAGAATTAGAAAAAAAAGCAGGCAATGCACATTTGGTTACTAAATATGCAAACATTTTGGGACAAAAATATCCG
GACTCCAAAGAATATCAGACCTATATAAATCATGACTATTGA

Upstream 100 bases:

>100_bases
ATGTAATCGATAGAACTAAACGCACTCAAGTTAAACAGCAAGGTGAGGCTATCCCTGTAAAACTGTTTAATCTTGATGTA
TTACAGCAAGGGAAAGCAGA

Downstream 100 bases:

>100_bases
ACATACAGAAGACAACATTGAAACCATTATCGCTCCAGGGCAGTTGTTAAAAAACGCTCGTGAAGCATCAAATCTAACGT
TAGAAGATATTTCAGCGCGC

Product: type 4 fimbrial biogenesis protein PilF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGLGYLNAGNMMKARENLELAAQYAPDYYRSQTSLAYY
YQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGRYEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTA
KTYFERSLAHDPHRVRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYP
DSKEYQTYINHDY

Sequences:

>Translated_253_residues
MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGLGYLNAGNMMKARENLELAAQYAPDYYRSQTSLAYY
YQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGRYEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTA
KTYFERSLAHDPHRVRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYP
DSKEYQTYINHDY
>Mature_253_residues
MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGLGYLNAGNMMKARENLELAAQYAPDYYRSQTSLAYY
YQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGRYEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTA
KTYFERSLAHDPHRVRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYP
DSKEYQTYINHDY

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28864; Mature: 28864

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGLGYLNAGNMMKARENL
CCEEHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCEEEEEEEEECCCCHHHHHHCH
ELAAQYAPDYYRSQTSLAYYYQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGR
HHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCC
YEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTAKTYFERSLAHDPHRVRSTLQ
CHHHHCEEEEEEECCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHH
LAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYP
HHEEECCCCCCCCCEEEEEEECHHCCCCCEEEEEEEEEECCCCCEEEHHHHHHHHCCCCC
DSKEYQTYINHDY
CCCCHHHHCCCCC
>Mature Secondary Structure
MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGLGYLNAGNMMKARENL
CCEEHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCEEEEEEEEECCCCHHHHHHCH
ELAAQYAPDYYRSQTSLAYYYQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGR
HHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCC
YEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTAKTYFERSLAHDPHRVRSTLQ
CHHHHCEEEEEEECCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHH
LAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYP
HHEEECCCCCCCCCEEEEEEECHHCCCCCEEEEEEEEEECCCCCEEEHHHHHHHHCCCCC
DSKEYQTYINHDY
CCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]