The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694300

Identifier: 209694300

GI number: 209694300

Start: 797562

End: 798602

Strand: Reverse

Name: 209694300

Synonym: VSAL_I0711

Alternate gene names: NA

Gene position: 798602-797562 (Counterclockwise)

Preceding gene: 209694303

Following gene: 209694299

Centisome position: 24.02

GC content: 39.58

Gene sequence:

>1041_bases
ATGGAACAGATTTATACGCTTAGCCAACTAATCCAACAGTCCAATTGTGAGTATGCTATTTATGATTTAGGTCGTCGTGT
CCAACGCATTGACAGTAAACAATTTGAGTCAATTGAAGCGGCACAACAACCTTATCTTTTTCCTTTGCAACGTCATGCTC
ACTTAGCTATCGCTTATTGGAATGAAACAAAACAACCTTGGATTTGGTTTTTAAAACTACCTCTAGATGAACGCAGTCTG
TTGCAACAAGCTGATGTAGGTAATTTTATTAAGTATGTAATTGAAGCGATTGGAGTCTCACTAAGCAGTGAGTTAAATGA
AGATCAACAACAAAATCTGTCCAACAATCCATACACGTTTAAGCCTAAAGATAACAAGATGGCGATGTTTCATAGCCTCT
TACGTGCTGACTTAAAACAGCCAATGAGTCAATATTACGAACAGGCGAAAACCTATCTTTCTGGCAATAATGGTTGGACT
AATTGGCAATCGGTTGGCGTTCAAGGGTTAGCTGATGTATGTGCAAATCTAAATAAAGACAATAACTCAGTCGCACTGCG
TAACGCATTAACCCACCTACCAAATACAGTTTTATACGCAACGCTAGGGTGCTTAGAGCACATTAAATTGCCAGAAAAAC
TAGCTCAAAGACAACTTGAAATCATTAATGATCTTTGCGACTCAGATGCTGCTGATTTATTTTTATTATCAGCCCACATT
CGCGCCCTTTCTGGCGCACCTAAAAAGGTCCTTTCTGAAGCATTAGCTCAAATTCTACGTAGTGAACGATTAAGCCACCC
TGAAGTATTAGTCGCAATTGCAGGGCGTTGCTGGGGAGGATTAGAAGACATTGCTATTGCGAATCAATTTTTACTTCGTT
TGGCCCAAACCGGTGATCAGCAACTCTTTAATCAACTGTTTGCCGATCTCGTAATGCAACCAACATTACGTATGTGTATG
TTACAAATTCTACACAGTGATGCCGACTCTCAACTGGCTCAAGCATTAGTCAAACTACAGCAAAATACGAAGAGTGAATA
A

Upstream 100 bases:

>100_bases
CCGATTGTTCTCGCACTCTCTAATACTTTTAATGACAAAGGATACCATCTTATCAACGGTTGGGTATAATCGAAGCATTA
ACCATTGAATAAGATATATC

Downstream 100 bases:

>100_bases
AAATGGAGAATCTCTTTGCGATACTCGGCTTAACGTTTTTTTGCTTTCTATTTTGGCAGCAACGAAGACAATCAGAATTT
GCTAACCAAGCAATTCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPYLFPLQRHAHLAIAYWNETKQPWIWFLKLPLDERSL
LQQADVGNFIKYVIEAIGVSLSSELNEDQQQNLSNNPYTFKPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWT
NWQSVGVQGLADVCANLNKDNNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEIINDLCDSDAADLFLLSAHI
RALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGLEDIAIANQFLLRLAQTGDQQLFNQLFADLVMQPTLRMCM
LQILHSDADSQLAQALVKLQQNTKSE

Sequences:

>Translated_346_residues
MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPYLFPLQRHAHLAIAYWNETKQPWIWFLKLPLDERSL
LQQADVGNFIKYVIEAIGVSLSSELNEDQQQNLSNNPYTFKPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWT
NWQSVGVQGLADVCANLNKDNNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEIINDLCDSDAADLFLLSAHI
RALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGLEDIAIANQFLLRLAQTGDQQLFNQLFADLVMQPTLRMCM
LQILHSDADSQLAQALVKLQQNTKSE
>Mature_346_residues
MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPYLFPLQRHAHLAIAYWNETKQPWIWFLKLPLDERSL
LQQADVGNFIKYVIEAIGVSLSSELNEDQQQNLSNNPYTFKPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWT
NWQSVGVQGLADVCANLNKDNNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEIINDLCDSDAADLFLLSAHI
RALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGLEDIAIANQFLLRLAQTGDQQLFNQLFADLVMQPTLRMCM
LQILHSDADSQLAQALVKLQQNTKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39212; Mature: 39212

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPYLFPLQRHAHLAIAYW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEE
NETKQPWIWFLKLPLDERSLLQQADVGNFIKYVIEAIGVSLSSELNEDQQQNLSNNPYTF
CCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCEE
KPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWTNWQSVGVQGLADVCANLNKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
NNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEIINDLCDSDAADLFLLSAHI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGLEDIAIANQFLLRLAQTGDQ
HHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
QLFNQLFADLVMQPTLRMCMLQILHSDADSQLAQALVKLQQNTKSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPYLFPLQRHAHLAIAYW
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEEE
NETKQPWIWFLKLPLDERSLLQQADVGNFIKYVIEAIGVSLSSELNEDQQQNLSNNPYTF
CCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCEE
KPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWTNWQSVGVQGLADVCANLNKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
NNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEIINDLCDSDAADLFLLSAHI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGLEDIAIANQFLLRLAQTGDQ
HHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
QLFNQLFADLVMQPTLRMCMLQILHSDADSQLAQALVKLQQNTKSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA