Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
---|---|
Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is suhB [C]
Identifier: 209694303
GI number: 209694303
Start: 799918
End: 800772
Strand: Reverse
Name: suhB [C]
Synonym: VSAL_I0714
Alternate gene names: 209694303
Gene position: 800772-799918 (Counterclockwise)
Preceding gene: 209694325
Following gene: 209694300
Centisome position: 24.08
GC content: 41.17
Gene sequence:
>855_bases ATGTATACTCGCGGCCGATTTCTGTTCTTTAACATCTTTTGGGATATAACTATGCATCCAATGCTAAATATTGCTATACG TACTGCGCGTAAAGCCGGTGACTTTGTTGCTAAATCTTTTGAGCAAACTGACAAAATTGAAACAACAAAAAAAGGCAATA ATGAGTTTATTACGAACATCGAAAACGATGCTCAATATATGCTTGTTGATATGATCAAGAAATCTTACCCTGATCACAGC ATCATTTCTGAAGAGTCTGGCCTAATCGAAGGCAGAGACGCTGACGTTCAATGGATCATTGACCCATTAGATGGCACTAC TAACTTCGTTAAAGGTATCCCACACTTCGCTATCTCTATTGCGGTTCGCATTAAAGGTCGCACAGAAGTTGCTTGTGTAT ACGATCCAATCCGTAATGAATTATTCACAGCTCAACGTGGTTCTGGTGCTCAACGCAACAACCAACGTATGCGTGTGCAA GAATTAAAAGACATGAATGAAACCATTCTTGCAACAGGTCTTCCTTACCGTCAAAAACAACACGCTGAAAGCTACACAAA AATCCTAGGCGCAATGTTTGTTGAATGTTCTGATATCCGCAGTTCTGGTTGCCCTTCTCTAGATTTATGTTATTTAGCAG CAGCTCGTATTGATGGTTTCTTCGCTCTAGGTCTTAAGCCTTGGGAAATCTCAGCAGCAGACCTAATCGCTCGTGAATCT GGCGTTATCTGTACTGACTTCACTGGCAATACTGACTACATGAAAACAGGTAACCTAGTTGCTGGTAGCCCACGTATGGT TAAGTCTATGCTTAAAAAAATCCGTGACAACGGCAGCGAAGCTCTTACTAAATAG
Upstream 100 bases:
>100_bases TTCTTCTTTATATACCAGAGATTTTAACCTGTAATCGCTTTTTTCATAATAAAGACACTAACTGAACAAAAAATAAACGC TTCCTTTTAATTATTAATTT
Downstream 100 bases:
>100_bases ACGCGTTGACGACATAATTGTCATTGATTGAAAATTGAATTAAAAAAAGGGAAGTGAATTAATTCACTTCCCTTTTTTAT TATCTCGATGTTATTGATGA
Product: inositol-1-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDKIETTKKGNNEFITNIENDAQYMLVDMIKKSYPDHS IISEESGLIEGRDADVQWIIDPLDGTTNFVKGIPHFAISIAVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQ ELKDMNETILATGLPYRQKQHAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFALGLKPWEISAADLIARES GVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEALTK
Sequences:
>Translated_284_residues MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDKIETTKKGNNEFITNIENDAQYMLVDMIKKSYPDHS IISEESGLIEGRDADVQWIIDPLDGTTNFVKGIPHFAISIAVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQ ELKDMNETILATGLPYRQKQHAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFALGLKPWEISAADLIARES GVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEALTK >Mature_284_residues MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDKIETTKKGNNEFITNIENDAQYMLVDMIKKSYPDHS IISEESGLIEGRDADVQWIIDPLDGTTNFVKGIPHFAISIAVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQ ELKDMNETILATGLPYRQKQHAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFALGLKPWEISAADLIARES GVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEALTK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=284, Percent_Identity=27.4647887323944, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI5031789, Length=260, Percent_Identity=28.4615384615385, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI7657236, Length=257, Percent_Identity=27.6264591439689, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI221625507, Length=144, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=58.8014981273408, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1790659, Length=129, Percent_Identity=29.4573643410853, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193202572, Length=261, Percent_Identity=32.5670498084291, Blast_Score=139, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193202570, Length=261, Percent_Identity=29.8850574712644, Blast_Score=127, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6320493, Length=234, Percent_Identity=26.0683760683761, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6321836, Length=219, Percent_Identity=26.9406392694064, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI21357329, Length=264, Percent_Identity=29.1666666666667, Blast_Score=131, Evalue=4e-31, Organism=Drosophila melanogaster, GI24664922, Length=262, Percent_Identity=27.4809160305344, Blast_Score=130, Evalue=9e-31, Organism=Drosophila melanogaster, GI24664926, Length=260, Percent_Identity=30, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI21357957, Length=270, Percent_Identity=27.7777777777778, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI21357303, Length=236, Percent_Identity=30.0847457627119, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24664918, Length=273, Percent_Identity=31.5018315018315, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 31905; Mature: 31905
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDKIETTKKGNNEFITNI CCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEC ENDAQYMLVDMIKKSYPDHSIISEESGLIEGRDADVQWIIDPLDGTTNFVKGIPHFAISI CCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCEEEEE AVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQELKDMNETILATGLPYRQKQ EEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCHHHHH HAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFALGLKPWEISAADLIARES HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCC GVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEALTK CCEEEECCCCCCCEECCCEEECCHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDKIETTKKGNNEFITNI CCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEC ENDAQYMLVDMIKKSYPDHSIISEESGLIEGRDADVQWIIDPLDGTTNFVKGIPHFAISI CCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCEEEEE AVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQELKDMNETILATGLPYRQKQ EEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCHHHHH HAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFALGLKPWEISAADLIARES HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCC GVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEALTK CCEEEECCCCCCCEECCCEEECCHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]