Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
---|---|
Accession | NC_011312 |
Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is pheA [H]
Identifier: 209694251
GI number: 209694251
Start: 733504
End: 734679
Strand: Reverse
Name: pheA [H]
Synonym: VSAL_I0661
Alternate gene names: 209694251
Gene position: 734679-733504 (Counterclockwise)
Preceding gene: 209694252
Following gene: 209694250
Centisome position: 22.09
GC content: 36.14
Gene sequence:
>1176_bases ATGACTGACACTCACTATTCCCTTGACGATATACGTTTACGCCTTAATGATCTTGATAATGAATTATTAAAGCTATTTTC TGAACGTCGTAAACTCAGTCTAAAAGTAGCAAAAAGCAAAGTTCAAACTTCAAAGCCTGTGCGTGATTCAAAACGCGAAC AGCAATTATTGGTAAAATTAATTAAAAATGGCAAAGCATTCGATTTAGATGCGCATTATATAACTCAAATTTTTCATACC ATTATTGAAGATTCCGTCTTACTGCAACAAGAATACTTCCAAAATTTAGCCAATCCAGAATTAAGTCGAAAGCCGATAGC CAGGGTTGCCTATCTTGGTTCTAAAGGATCTTATTCAAACCTAGCTAGTCGTCGTTATTTTAGTAAGAAAAATACTGAAT TAGCTGAATTAGGTTGTGAAAACTTTAGGGAAGTCATTAAGACTGTTGAATCAGGCCACGCTGATTACGGAGTATTACCA ATTGAGAATACGAGCTCAGGCTCAATTAACGAGGTCTATGACCTACTGCAACATACCAGTTTATACATCGTTGGTGAGTT AACTCAAAAAATAGACCATTGCTTGCTAACGACTTCTGAAACGTCGTTAGAGCAAATAACAACACTCTACTCACACCCTC AACCACATCAGCAATGTAGTGAGTTTCTAAATCGTTTAGATAACGTAGAACTCATTTCTTGCTCAAGCACTGCTGATGCC ATGATTATGGTCAAAGATATTAATTCACCGACGGTTGCTGCTATCGGAAACTCCGACAGTGGTAAATTATATAGCTTACA ACAACTCATTACTAACATCTCAAATCAAACCGAAAATCAAACTCGATTCATTGTTGTGGCAAGAAAACCGGTTGATGTTT CGGAACAAATACCAGCGAAAACGACATTAATTATGTCTACTTCACAAGATGCAGGCTCACTTGTTGAATCTTTACTTGTT CTAAGAAAATACGGTATTAATATGACGAAATTAGAGTCTCGTCCTATCATGGGGAATCCGTGGGAAGAAATGTTTTATAT TGATTTAGAAGCCCATTTAAAATCAGATGCAATGAATTCAGCCATTGAAGAACTAACGTCAATTACACAATATTTAAAAG TTCTTGGTTGCTATCCAATAGAGAATGTAACTCCGACAACTATCCCTTTAACTTAA
Upstream 100 bases:
>100_bases TTTCTGAAACAGCGCTCATTTGAGCGCTGTTTTTTCTTGACGCAAACTTACCTCTTCCTTTATTGTGAATTAACTCTTAA TTTACTAGGTTTGCTTATCC
Downstream 100 bases:
>100_bases TAATTGGATGCAGAAAATGAATGTGATTATTGCCTCTTTGAACCCCGCAAAAATAAATGCAGTAAAAGCGGCATTTACTT TAGTTTTTCCTGATACCACT
Product: P-protein (includes: chorismate mutase and prephenate dehydratase)
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSKPVRDSKREQQLLVKLIKNGKAFDLDAHYITQIFHT IIEDSVLLQQEYFQNLANPELSRKPIARVAYLGSKGSYSNLASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLP IENTSSGSINEVYDLLQHTSLYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEFLNRLDNVELISCSSTADA MIMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTSQDAGSLVESLLV LRKYGINMTKLESRPIMGNPWEEMFYIDLEAHLKSDAMNSAIEELTSITQYLKVLGCYPIENVTPTTIPLT
Sequences:
>Translated_391_residues MTDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSKPVRDSKREQQLLVKLIKNGKAFDLDAHYITQIFHT IIEDSVLLQQEYFQNLANPELSRKPIARVAYLGSKGSYSNLASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLP IENTSSGSINEVYDLLQHTSLYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEFLNRLDNVELISCSSTADA MIMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTSQDAGSLVESLLV LRKYGINMTKLESRPIMGNPWEEMFYIDLEAHLKSDAMNSAIEELTSITQYLKVLGCYPIENVTPTTIPLT >Mature_390_residues TDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSKPVRDSKREQQLLVKLIKNGKAFDLDAHYITQIFHTI IEDSVLLQQEYFQNLANPELSRKPIARVAYLGSKGSYSNLASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLPI ENTSSGSINEVYDLLQHTSLYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEFLNRLDNVELISCSSTADAM IMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTSQDAGSLVESLLVL RKYGINMTKLESRPIMGNPWEEMFYIDLEAHLKSDAMNSAIEELTSITQYLKVLGCYPIENVTPTTIPLT
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=378, Percent_Identity=55.026455026455, Blast_Score=421, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6324013, Length=306, Percent_Identity=24.1830065359477, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 44060; Mature: 43929
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSKPVRDSKREQQLLVKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IKNGKAFDLDAHYITQIFHTIIEDSVLLQQEYFQNLANPELSRKPIARVAYLGSKGSYSN HHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCHHH LASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLPIENTSSGSINEVYDLLQHTS HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCC LYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEFLNRLDNVELISCSSTADA EEEEHHHHHHHHHHEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCE MIMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQTRFIVVARKPVDVSEQIPAK EEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCC TTLIMSTSQDAGSLVESLLVLRKYGINMTKLESRPIMGNPWEEMFYIDLEAHLKSDAMNS EEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEEEHHHHHHHHHHHH AIEELTSITQYLKVLGCYPIENVTPTTIPLT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSKPVRDSKREQQLLVKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IKNGKAFDLDAHYITQIFHTIIEDSVLLQQEYFQNLANPELSRKPIARVAYLGSKGSYSN HHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCHHH LASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLPIENTSSGSINEVYDLLQHTS HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCC LYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEFLNRLDNVELISCSSTADA EEEEHHHHHHHHHHEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCE MIMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQTRFIVVARKPVDVSEQIPAK EEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCC TTLIMSTSQDAGSLVESLLVLRKYGINMTKLESRPIMGNPWEEMFYIDLEAHLKSDAMNS EEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHEEEEEHHHHHHHHHHHH AIEELTSITQYLKVLGCYPIENVTPTTIPLT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561; 1444388 [H]