The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is mviN [H]

Identifier: 209694170

GI number: 209694170

Start: 634534

End: 636093

Strand: Direct

Name: mviN [H]

Synonym: VSAL_I0578

Alternate gene names: 209694170

Gene position: 634534-636093 (Clockwise)

Preceding gene: 209694168

Following gene: 209694171

Centisome position: 19.08

GC content: 39.29

Gene sequence:

>1560_bases
GTGAGTAAACGACTTTTACGTTCTGGCTTAATCGTCAGTATCATGACTTTAGTGTCTCGAGTACTCGGTTTAGTCCGTGA
TGTAGTAGTGGCAAATTTAATGGGCGCAGGGGCATCTGCAGATGTTTTCTTCTTTGCGAATAAGATACCTAACTTCTTAC
GCCGCTTATTTGCTGAGGGGGCTTTTTCACAAGCCTTCGTCCCTGTATTAACCGAATATCACGCCAGTGGTGATGATAAT
AAAACGCGAGAATTAATTGCGAAAGCGTCGGGAACTCTTGGTGTGCTTGTCACCATTGTTACTTTTTTCGGTATTTTAGG
CTCTGGTGTCGTAACGGCATTATTTGGGGCTGGTTGGTTTATGGATTGGTTGAATGATGGGCCTAATGCGCCTAAATTTG
AGCTTGCTAGCTTCTTATTAAAAATAACCTTTCCTTATCTCTGGTTTATTACTTTTGTTGCTTTATCCGGTGCGATTTTA
AATACGTTAGGTAAATTTGCCGTTTCTTCTTTTACTCCTGTTTTTTTAAATGTAGCCATTATTGCTTGTGCCTATTTTAT
TTCACCAAACTTAGAGCAACCTGAAATTGGGTTAGCGATTGGTGTTTTTCTTGGCGGTTTAATTCAATTCTTATTCCAGA
TCCCATTTCTTTATAAAGCCAAAATGTTGGTTCGTCCGCAATGGGGCTGGAATGATCCTGGTGTTGTAAAAATTAGAACC
TTAATGATCCCTGCATTATTTGGGGTATCGGTAAGTCAAATTAACTTATTGTTTGATACTTTTATCGCGAGTTTTTTAGC
GACGGGTTCTATCAGTTGGCTTTACTATTCGGATCGTTTATTAGAGTTCCCATTAGGGTTATTTGGGATTGCTATTGCCA
CTGTGATCCTACCTGCACTCTCTCGTCAGCATGTTGATGCAAAAGGGGCGGGGTTCTCTAATACGATGGATTGGGGAGTT
AGAATGGTTATTTTACTTGGGATCCCTGCAATGTTAGGTTTAATGGTATTAGCAAAACCTATGCTAATGGTATTGTTCAT
GCGTGGTGAATTTTCACCAAATGATGTACATAACGCCTCGCTGTCTTTGATCGCCTATGGGTCTGGCTTATTAAACTTTA
TGTTAATCAAGATATTAGCGCCTGGTTATTATGCAAGGCAAGATACTAAAACTCCGGTTCGTTACGGCATCATTGCGATG
GTTACGAATATGGTTTTTAATGCTATTTTTGCGTCTTTCTATGGCTATGTTGGCCTAGCAATGGCAACGGCATTGTCTGC
ATTTGTGAATATGGCATTATTATATCGCGGATTACATTTAGCGAATGTTTATAAATTATCAAAAGAAACCATGATATTTA
TTGTGAAATTGGTTTTATCTGGTGCCATTATGGTTGGCGTTTTATTGTGGTTTATACCAGCAATGAACGTATGGCTTGAG
TGGGATCTAGCAAAAAGAATGGCCATGTTATTAAGCTTTATTGCTCTTGGTGCGGTAAGTTATTTAATTCCTGCTGTGAT
ATTGGGTTTGCGCCCACGTCAATTACGAGTTAATGCATAA

Upstream 100 bases:

>100_bases
GAATGGCAAAACACGGTTAAGATGGCGTGCATTCTAACAGCATTTTTTACAGTTAGTAAGCTCTTTATGGTCATCATCAC
CATCTTTGTGAGGTTTTTTT

Downstream 100 bases:

>100_bases
TCTTGTTATTCACTGAGTTGAGTGGTTTGGCTAGTAAGATTAGTATATAATTCGTCAGTTTTTTTGAGCAAATAAATTGA
TATTGAGATAATGGAATTAA

Product: virulence factor MviN homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEGAFSQAFVPVLTEYHASGDDN
KTRELIAKASGTLGVLVTIVTFFGILGSGVVTALFGAGWFMDWLNDGPNAPKFELASFLLKITFPYLWFITFVALSGAIL
NTLGKFAVSSFTPVFLNVAIIACAYFISPNLEQPEIGLAIGVFLGGLIQFLFQIPFLYKAKMLVRPQWGWNDPGVVKIRT
LMIPALFGVSVSQINLLFDTFIASFLATGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRQHVDAKGAGFSNTMDWGV
RMVILLGIPAMLGLMVLAKPMLMVLFMRGEFSPNDVHNASLSLIAYGSGLLNFMLIKILAPGYYARQDTKTPVRYGIIAM
VTNMVFNAIFASFYGYVGLAMATALSAFVNMALLYRGLHLANVYKLSKETMIFIVKLVLSGAIMVGVLLWFIPAMNVWLE
WDLAKRMAMLLSFIALGAVSYLIPAVILGLRPRQLRVNA

Sequences:

>Translated_519_residues
MSKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEGAFSQAFVPVLTEYHASGDDN
KTRELIAKASGTLGVLVTIVTFFGILGSGVVTALFGAGWFMDWLNDGPNAPKFELASFLLKITFPYLWFITFVALSGAIL
NTLGKFAVSSFTPVFLNVAIIACAYFISPNLEQPEIGLAIGVFLGGLIQFLFQIPFLYKAKMLVRPQWGWNDPGVVKIRT
LMIPALFGVSVSQINLLFDTFIASFLATGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRQHVDAKGAGFSNTMDWGV
RMVILLGIPAMLGLMVLAKPMLMVLFMRGEFSPNDVHNASLSLIAYGSGLLNFMLIKILAPGYYARQDTKTPVRYGIIAM
VTNMVFNAIFASFYGYVGLAMATALSAFVNMALLYRGLHLANVYKLSKETMIFIVKLVLSGAIMVGVLLWFIPAMNVWLE
WDLAKRMAMLLSFIALGAVSYLIPAVILGLRPRQLRVNA
>Mature_518_residues
SKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEGAFSQAFVPVLTEYHASGDDNK
TRELIAKASGTLGVLVTIVTFFGILGSGVVTALFGAGWFMDWLNDGPNAPKFELASFLLKITFPYLWFITFVALSGAILN
TLGKFAVSSFTPVFLNVAIIACAYFISPNLEQPEIGLAIGVFLGGLIQFLFQIPFLYKAKMLVRPQWGWNDPGVVKIRTL
MIPALFGVSVSQINLLFDTFIASFLATGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRQHVDAKGAGFSNTMDWGVR
MVILLGIPAMLGLMVLAKPMLMVLFMRGEFSPNDVHNASLSLIAYGSGLLNFMLIKILAPGYYARQDTKTPVRYGIIAMV
TNMVFNAIFASFYGYVGLAMATALSAFVNMALLYRGLHLANVYKLSKETMIFIVKLVLSGAIMVGVLLWFIPAMNVWLEW
DLAKRMAMLLSFIALGAVSYLIPAVILGLRPRQLRVNA

Specific function: Unknown

COG id: COG0728

COG function: function code R; Uncharacterized membrane protein, putative virulence factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mviN family [H]

Homologues:

Organism=Escherichia coli, GI1787309, Length=514, Percent_Identity=40.6614785992218, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004268 [H]

Pfam domain/function: PF03023 MVIN [H]

EC number: NA

Molecular weight: Translated: 56826; Mature: 56695

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
AFSQAFVPVLTEYHASGDDNKTRELIAKASGTLGVLVTIVTFFGILGSGVVTALFGAGWF
CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDWLNDGPNAPKFELASFLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVAI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IACAYFISPNLEQPEIGLAIGVFLGGLIQFLFQIPFLYKAKMLVRPQWGWNDPGVVKIRT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEHHH
LMIPALFGVSVSQINLLFDTFIASFLATGSISWLYYSDRLLEFPLGLFGIAIATVILPAL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SRQHVDAKGAGFSNTMDWGVRMVILLGIPAMLGLMVLAKPMLMVLFMRGEFSPNDVHNAS
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LSLIAYGSGLLNFMLIKILAPGYYARQDTKTPVRYGIIAMVTNMVFNAIFASFYGYVGLA
EEHEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MATALSAFVNMALLYRGLHLANVYKLSKETMIFIVKLVLSGAIMVGVLLWFIPAMNVWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WDLAKRMAMLLSFIALGAVSYLIPAVILGLRPRQLRVNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
SKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFFANKIPNFLRRLFAEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9457888; 10952301 [H]