Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 209694134

GI number: 209694134

Start: 595507

End: 596061

Strand: Reverse

Name: yggT [C]

Synonym: VSAL_I0541

Alternate gene names: 209694134

Gene position: 596061-595507 (Counterclockwise)

Preceding gene: 209694135

Following gene: 209694133

Centisome position: 17.93

GC content: 38.92

Gene sequence:

>555_bases
ATGAATGCAATGAGCTTTTTAATCTCTACCGTTTTTGATTTATACATAATGGTTGTGATTCTACGAATTTGGTTACAAGT
GGCACGTGCCGATTTCTATAACCCATTTTCACAATTTATCATCAAGGCTACGCAACCTGTTGTTTCGCCTTTACGTCGTA
TTATTCCATCAATAGGAAGCTTAGATTTAGCCACCGTTCTGTTTGCTTATGTTCTGTGTGTTGTTAAATTTGTTGCTCTG
CAAGTTGTCGTTTCAGGCGGAATTACTTTTGGACCTGAGTTTTTAATCATTGGTCTAATTGCTCTTGCAAAAGCCGCTGG
TGGTTTGCTGTTCTGGATTTTATTAGTTCGAGCAATCCTAAGCTGGGTTAGTCAAGGTCGTAGCCCAATTGAATATGTAA
TGAACCAATTGACGGAACCAATGCTTGCTCCTATTCGTAAGATCCTTCCTCAAATGGGCGGATTAGATTTAAGCGTATTA
GTGCTGTTCATTGTGCTTCAATTTGCTAACTTCTTAATGGGTGATTTACTTGGCCCGATTTGGTATAGCTTGTAA

Upstream 100 bases:

>100_bases
AGAAGAAATGGAAACGTTGTTTTAAAAACTGCTTTGCTTGAAGCAACTCTGTTTAAAAAACGCTATAAAAAAAACCAATG
ATTTTTAAGGTTAACTAACT

Downstream 100 bases:

>100_bases
TCTGATCTATATTGGAATCTAAGCAATAATGCCAATTAAATACGATAACGATGATTTGGTCTTAAGACTTTACCTTCAAC
CGAAGGCCAGTCGAGACCAA

Product: membrane protein, related to K+ transport

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQPVVSPLRRIIPSIGSLDLATVLFAYVLCVVKFVAL
QVVVSGGITFGPEFLIIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLLGPIWYSL

Sequences:

>Translated_184_residues
MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQPVVSPLRRIIPSIGSLDLATVLFAYVLCVVKFVAL
QVVVSGGITFGPEFLIIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLLGPIWYSL
>Mature_184_residues
MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQPVVSPLRRIIPSIGSLDLATVLFAYVLCVVKFVAL
QVVVSGGITFGPEFLIIGLIALAKAAGGLLFWILLVRAILSWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVL
VLFIVLQFANFLMGDLLGPIWYSL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=177, Percent_Identity=53.6723163841808, Blast_Score=190, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20406; Mature: 20406

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQPVVSPLRRIIPSIGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDLATVLFAYVLCVVKFVALQVVVSGGITFGPEFLIIGLIALAKAAGGLLFWILLVRAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVLVLFIVLQFANFLMGDLLGPI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYSL
HHCC
>Mature Secondary Structure
MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQPVVSPLRRIIPSIGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDLATVLFAYVLCVVKFVALQVVVSGGITFGPEFLIIGLIALAKAAGGLLFWILLVRAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVLVLFIVLQFANFLMGDLLGPI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WYSL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]