| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is lptB [H]
Identifier: 209694094
GI number: 209694094
Start: 559040
End: 559765
Strand: Reverse
Name: lptB [H]
Synonym: VSAL_I0499
Alternate gene names: 209694094
Gene position: 559765-559040 (Counterclockwise)
Preceding gene: 209694095
Following gene: 209694093
Centisome position: 16.83
GC content: 40.63
Gene sequence:
>726_bases ATGGCCATATTAGAAGCAAAAAACCTCGCAAAAACATACGGCAGCCGTAAAGTCGTATCTGATGTAAGCCTAACGGTTGA GTCAGGGAAAATTGTTGGCCTTCTTGGCCCTAACGGCGCGGGTAAAACAACGTCTTTCTATATGATTGTTGGTTTAGTGT CTCGCGATGAAGGCTCTATCACTATTGATGGTGTCGATATTTCACTTCAACCAATGCATAACCGTTCAAAAATGGGCATT GGCTATTTACCTCAAGAAGCGTCTATTTTTAGAAAACTGTCCGTATTCGATAACATCATGGCAGTGCTTCAAACTCGCAA AGATTTATCTAAAGCAGAACGCTTAGATAAACTTGAAGAGTTATTGGATGAATTTAATATTCAGCACATTCGCAACAGTA ACGGCATGGCTCTTTCTGGTGGCGAACGTCGTCGAGTTGAGATCGCTCGTGCATTAGCCGCAAACCCAAAGTTCATTTTA CTTGATGAACCTTTTGCCGGTGTTGATCCTATTTCTGTAATCGACATCAAAAAAATCATTCAACATTTAAGAGACCGAGG GTTAGGTGTGTTAATTACAGACCACAACGTTCGTGAAACTCTCGATGTGTGTGAACACGCTTATATCGTAAGCCAAGGTC ATATGATTGCAAATGGTACCCCCGAACACGTATTAAATGATGAACATGTAAAACGCGTTTATCTTGGTGATCAATTTAAG TTGTAA
Upstream 100 bases:
>100_bases CCTATAATATGAAGACACAAAAGTTAATTGCGGATGGTGGTAAAGACGAACGAGTCACTACTATTCTCCAACCTAGTCAA TTGAATAAAAAACAATAATT
Downstream 100 bases:
>100_bases TGGATTAATAAAGGTATCGCTAAATAATGAAAGCATCTCTTCAGCTAAAAATGGGCCAACAGCTTGCAATGACTCCTCAG TTGCAGCAAGCCATTCGATT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MAILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVSRDEGSITIDGVDISLQPMHNRSKMGI GYLPQEASIFRKLSVFDNIMAVLQTRKDLSKAERLDKLEELLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFIL LDEPFAGVDPISVIDIKKIIQHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFK L
Sequences:
>Translated_241_residues MAILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVSRDEGSITIDGVDISLQPMHNRSKMGI GYLPQEASIFRKLSVFDNIMAVLQTRKDLSKAERLDKLEELLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFIL LDEPFAGVDPISVIDIKKIIQHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFK L >Mature_240_residues AILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVSRDEGSITIDGVDISLQPMHNRSKMGIG YLPQEASIFRKLSVFDNIMAVLQTRKDLSKAERLDKLEELLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFILL DEPFAGVDPISVIDIKKIIQHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFKL
Specific function: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system [H]
COG id: COG1137
COG function: function code R; ABC-type (unclassified) transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=221, Percent_Identity=29.8642533936652, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=30.1801801801802, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI45446740, Length=230, Percent_Identity=29.5652173913043, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI47078218, Length=230, Percent_Identity=29.5652173913043, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI171184400, Length=237, Percent_Identity=31.6455696202532, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=31.304347826087, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI150417984, Length=224, Percent_Identity=26.7857142857143, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27477115, Length=219, Percent_Identity=28.7671232876712, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI30795238, Length=220, Percent_Identity=29.0909090909091, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI27881501, Length=220, Percent_Identity=29.0909090909091, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI11967969, Length=228, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI21536376, Length=217, Percent_Identity=29.9539170506912, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI6005701, Length=205, Percent_Identity=29.7560975609756, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI46592915, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI46592964, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI46592956, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI46592971, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI46592978, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI46592898, Length=208, Percent_Identity=25.9615384615385, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=29.9107142857143, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=29.9107142857143, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=29.9107142857143, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI255708477, Length=245, Percent_Identity=28.9795918367347, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI148612844, Length=245, Percent_Identity=28.9795918367347, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI9955963, Length=171, Percent_Identity=32.7485380116959, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI9955968, Length=249, Percent_Identity=29.718875502008, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI9955966, Length=249, Percent_Identity=29.718875502008, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI45243524, Length=249, Percent_Identity=29.718875502008, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI156105685, Length=231, Percent_Identity=28.1385281385281, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI215820660, Length=192, Percent_Identity=26.5625, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI20143975, Length=192, Percent_Identity=26.5625, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI42741659, Length=175, Percent_Identity=32, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI90421313, Length=239, Percent_Identity=25.5230125523013, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI42490749, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI89111135, Length=213, Percent_Identity=29.1079812206573, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI11967971, Length=218, Percent_Identity=25.6880733944954, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI66529005, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21729873, Length=216, Percent_Identity=31.0185185185185, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI15149474, Length=216, Percent_Identity=31.0185185185185, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI190343023, Length=153, Percent_Identity=30.718954248366, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=75.5186721991701, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=32.7800829875519, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=29.6, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI1788450, Length=222, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI87082268, Length=235, Percent_Identity=30.2127659574468, Blast_Score=123, Evalue=8e-30, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=33.8912133891213, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI87081782, Length=231, Percent_Identity=30.7359307359307, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=31.390134529148, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1788165, Length=222, Percent_Identity=34.2342342342342, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786563, Length=212, Percent_Identity=33.0188679245283, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=29.2887029288703, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=29.4117647058824, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=28.2051282051282, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1790739, Length=251, Percent_Identity=28.6852589641434, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1789586, Length=224, Percent_Identity=31.6964285714286, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=30.4, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=30.6976744186047, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=27.8260869565217, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1789672, Length=225, Percent_Identity=29.3333333333333, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787792, Length=234, Percent_Identity=28.2051282051282, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=29.4372294372294, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787712, Length=216, Percent_Identity=29.6296296296296, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI48994943, Length=224, Percent_Identity=28.125, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1790190, Length=222, Percent_Identity=26.1261261261261, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786345, Length=238, Percent_Identity=28.1512605042017, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1789032, Length=225, Percent_Identity=28, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=28.4444444444444, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788472, Length=219, Percent_Identity=28.310502283105, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=28.7037037037037, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=27.9475982532751, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787089, Length=212, Percent_Identity=28.3018867924528, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1790162, Length=229, Percent_Identity=28.3842794759825, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=25.7261410788382, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789991, Length=220, Percent_Identity=26.8181818181818, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788053, Length=170, Percent_Identity=32.3529411764706, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=26.4462809917355, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788644, Length=241, Percent_Identity=28.2157676348548, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI48994883, Length=240, Percent_Identity=27.0833333333333, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=28.0373831775701, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=29.5238095238095, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1788897, Length=222, Percent_Identity=30.1801801801802, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082267, Length=226, Percent_Identity=26.5486725663717, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=27.3148148148148, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786698, Length=200, Percent_Identity=28, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788002, Length=232, Percent_Identity=29.3103448275862, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787105, Length=201, Percent_Identity=27.8606965174129, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI2367384, Length=169, Percent_Identity=33.7278106508876, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788210, Length=219, Percent_Identity=25.5707762557078, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787759, Length=239, Percent_Identity=26.7782426778243, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787143, Length=236, Percent_Identity=27.1186440677966, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=26.7782426778243, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787112, Length=230, Percent_Identity=28.695652173913, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=25.4807692307692, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787500, Length=218, Percent_Identity=25.6880733944954, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787758, Length=220, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI145693107, Length=244, Percent_Identity=22.5409836065574, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790534, Length=209, Percent_Identity=26.7942583732057, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87082064, Length=213, Percent_Identity=29.1079812206573, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787547, Length=251, Percent_Identity=22.7091633466135, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788540, Length=175, Percent_Identity=30.2857142857143, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786653, Length=210, Percent_Identity=26.1904761904762, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786981, Length=226, Percent_Identity=28.7610619469027, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=232, Percent_Identity=33.6206896551724, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=33.1858407079646, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI71983516, Length=221, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71983523, Length=221, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71983510, Length=221, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17565586, Length=227, Percent_Identity=30.8370044052863, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=30.2127659574468, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71992285, Length=198, Percent_Identity=30.3030303030303, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI115534520, Length=233, Percent_Identity=27.8969957081545, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17533971, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI86563255, Length=219, Percent_Identity=28.310502283105, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25146777, Length=220, Percent_Identity=28.6363636363636, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71992290, Length=247, Percent_Identity=25.9109311740891, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115533592, Length=226, Percent_Identity=26.1061946902655, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI212646699, Length=190, Percent_Identity=30.5263157894737, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17543740, Length=164, Percent_Identity=30.4878048780488, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71988343, Length=233, Percent_Identity=27.4678111587983, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115535101, Length=218, Percent_Identity=28.8990825688073, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71996809, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211015, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17565938, Length=224, Percent_Identity=25.8928571428571, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17569143, Length=228, Percent_Identity=28.5087719298246, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211017, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202349, Length=246, Percent_Identity=27.2357723577236, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17569145, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17569081, Length=223, Percent_Identity=26.0089686098655, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71984940, Length=231, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558664, Length=159, Percent_Identity=31.4465408805031, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=178, Percent_Identity=30.3370786516854, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17567265, Length=161, Percent_Identity=31.055900621118, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17552232, Length=232, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17511077, Length=240, Percent_Identity=24.5833333333333, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193209708, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193208177, Length=214, Percent_Identity=25.2336448598131, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71996550, Length=212, Percent_Identity=24.5283018867925, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552010, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538654, Length=201, Percent_Identity=26.3681592039801, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322957, Length=223, Percent_Identity=30.4932735426009, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323217, Length=203, Percent_Identity=27.0935960591133, Blast_Score=75, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325199, Length=196, Percent_Identity=29.5918367346939, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324498, Length=228, Percent_Identity=25.4385964912281, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319856, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324904, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324398, Length=199, Percent_Identity=28.1407035175879, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=242, Percent_Identity=26.0330578512397, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324985, Length=176, Percent_Identity=26.1363636363636, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=248, Percent_Identity=28.6290322580645, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320214, Length=195, Percent_Identity=27.1794871794872, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320614, Length=193, Percent_Identity=27.4611398963731, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=170, Percent_Identity=26.4705882352941, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324585, Length=199, Percent_Identity=29.1457286432161, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324727, Length=207, Percent_Identity=25.6038647342995, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24666092, Length=230, Percent_Identity=36.9565217391304, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24648314, Length=217, Percent_Identity=30.8755760368664, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=31.063829787234, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI28574150, Length=211, Percent_Identity=31.2796208530806, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI116007328, Length=211, Percent_Identity=31.2796208530806, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI221512771, Length=217, Percent_Identity=30.4147465437788, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24650855, Length=235, Percent_Identity=31.063829787234, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24650853, Length=235, Percent_Identity=31.063829787234, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI28573573, Length=217, Percent_Identity=30.8755760368664, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI28573571, Length=217, Percent_Identity=30.8755760368664, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI281362751, Length=235, Percent_Identity=31.063829787234, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI221500365, Length=229, Percent_Identity=28.82096069869, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007184, Length=229, Percent_Identity=28.82096069869, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI85725262, Length=242, Percent_Identity=30.5785123966942, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24582014, Length=234, Percent_Identity=28.2051282051282, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24582012, Length=234, Percent_Identity=28.2051282051282, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24662800, Length=218, Percent_Identity=25.6880733944954, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI85816269, Length=215, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24580553, Length=215, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI85724864, Length=215, Percent_Identity=25.5813953488372, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24580555, Length=215, Percent_Identity=25.5813953488372, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581191, Length=223, Percent_Identity=26.0089686098655, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581189, Length=223, Percent_Identity=26.0089686098655, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581193, Length=223, Percent_Identity=26.0089686098655, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581195, Length=223, Percent_Identity=26.0089686098655, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI161076682, Length=210, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI161076684, Length=210, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581617, Length=210, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581615, Length=210, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574533, Length=216, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24659289, Length=235, Percent_Identity=28.0851063829787, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI17647959, Length=225, Percent_Identity=28.8888888888889, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI21357907, Length=171, Percent_Identity=33.9181286549708, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24581407, Length=185, Percent_Identity=29.1891891891892, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI45552199, Length=185, Percent_Identity=29.1891891891892, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI23397593, Length=252, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45552805, Length=172, Percent_Identity=26.7441860465116, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI19920532, Length=214, Percent_Identity=25.2336448598131, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24580930, Length=214, Percent_Identity=25.2336448598131, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI17647219, Length=176, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641565, Length=169, Percent_Identity=31.3609467455621, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI85724858, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85724856, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580547, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580551, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580549, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24580545, Length=225, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574744, Length=215, Percent_Identity=24.6511627906977, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571209, Length=223, Percent_Identity=26.457399103139, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=185, Percent_Identity=31.3513513513514, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24653245, Length=239, Percent_Identity=27.1966527196653, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI281363262, Length=239, Percent_Identity=26.7782426778243, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17136662, Length=215, Percent_Identity=28.3720930232558, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552355, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552337, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552361, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552359, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552347, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45550972, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552357, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552353, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552343, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552335, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552349, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583969, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552363, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552339, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552341, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552345, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552351, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI28574259, Length=238, Percent_Identity=28.9915966386555, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136592, Length=225, Percent_Identity=20.4444444444444, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24650986, Length=211, Percent_Identity=26.5402843601896, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358185, Length=211, Percent_Identity=26.5402843601896, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161077321, Length=182, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581409, Length=154, Percent_Identity=29.2207792207792, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24649703, Length=232, Percent_Identity=25.8620689655172, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI221460257, Length=206, Percent_Identity=28.1553398058252, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26670; Mature: 26539
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVSRDEGSI CCEECHHHHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCCCE TIDGVDISLQPMHNRSKMGIGYLPQEASIFRKLSVFDNIMAVLQTRKDLSKAERLDKLEE EEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKII HHHHCCHHEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH QHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFK HHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCEEEECCCHHHHCCHHHHEEEECCCCCC L C >Mature Secondary Structure AILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVSRDEGSI CEECHHHHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECCCCCE TIDGVDISLQPMHNRSKMGIGYLPQEASIFRKLSVFDNIMAVLQTRKDLSKAERLDKLEE EEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKII HHHHCCHHEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH QHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFK HHHHHCCCEEEEECCCHHHHHHHHHHHEEEECCEEEECCCHHHHCCHHHHEEEECCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]