The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is mshP

Identifier: 209694077

GI number: 209694077

Start: 536163

End: 536597

Strand: Direct

Name: mshP

Synonym: VSAL_I0481

Alternate gene names: NA

Gene position: 536163-536597 (Clockwise)

Preceding gene: 209694076

Following gene: 209694078

Centisome position: 16.12

GC content: 40.0

Gene sequence:

>435_bases
ATGTTCCATAACTACGCAAAGCAGAGTGGTAATATATTGATATTATCAGTGATTATTATGGTTGTTGTTGGTTTTCTTTC
GTTAAATTTGTTGAAGGTCGAAACGAGTAATCACGATGCGGTTTCTAAAGAAGTGTTAGGAACGCAAGCGTGGTTTTTAG
CATACTCAGGAGCTGAGTGGGGATTAGTTCAACTGTTCCCTATTGGCGTTTCAGGTGCGGATTCTAGTCTATGTGATGAA
GAGATACATCGACCTAATATGGCATTAAATAACAGTGGTTGTTCAAGTGAACCTGAAGTGGTTTGTGTTGCCACGCCTGT
GAACCATTTAGGTGAAGTGATTACGTATTTTAAAATCACGAGTACGGCTGTTTGTGGCTCGGGAATAAACCAAGTAGCAC
GAATTCAAGAAGTTTGGGCGAAGGAGATAAATTGA

Upstream 100 bases:

>100_bases
AGTGCCTCAATGCATCGAAACAGTACCGTTCGGATGGTGTTAGCTTTTACTAATGGTCTCGATGAAGTAACTCAATATCA
ACATGATGTGCAGGTGATGA

Downstream 100 bases:

>100_bases
TGAAAACTAACATGAAATACTTGTTTTTTGTTGTTTCAATTTTTATAGTAAATACAGCTTGGGCTGATTCTTATATTTCT
TGTAACGTATCGAGTGAACA

Product: protein MshP

Products: NA

Alternate protein names: Exported Protein MshP

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEVLGTQAWFLAYSGAEWGLVQLFPIGVSGADSSLCDE
EIHRPNMALNNSGCSSEPEVVCVATPVNHLGEVITYFKITSTAVCGSGINQVARIQEVWAKEIN

Sequences:

>Translated_144_residues
MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEVLGTQAWFLAYSGAEWGLVQLFPIGVSGADSSLCDE
EIHRPNMALNNSGCSSEPEVVCVATPVNHLGEVITYFKITSTAVCGSGINQVARIQEVWAKEIN
>Mature_144_residues
MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEVLGTQAWFLAYSGAEWGLVQLFPIGVSGADSSLCDE
EIHRPNMALNNSGCSSEPEVVCVATPVNHLGEVITYFKITSTAVCGSGINQVARIQEVWAKEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15553; Mature: 15553

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEVLGTQAWFLAYSGAEW
CCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHCCCEEEEEECCCCC
GLVQLFPIGVSGADSSLCDEEIHRPNMALNNSGCSSEPEVVCVATPVNHLGEVITYFKIT
CEEEEEEECCCCCCCHHHHHHHCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
STAVCGSGINQVARIQEVWAKEIN
HHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEVLGTQAWFLAYSGAEW
CCCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHCCCEEEEEECCCCC
GLVQLFPIGVSGADSSLCDEEIHRPNMALNNSGCSSEPEVVCVATPVNHLGEVITYFKIT
CEEEEEEECCCCCCCHHHHHHHCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
STAVCGSGINQVARIQEVWAKEIN
HHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA