| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mreB [H]
Identifier: 209694078
GI number: 209694078
Start: 541014
End: 542057
Strand: Direct
Name: mreB [H]
Synonym: VSAL_I0483
Alternate gene names: 209694078
Gene position: 541014-542057 (Clockwise)
Preceding gene: 209694077
Following gene: 209694079
Centisome position: 16.27
GC content: 45.88
Gene sequence:
>1044_bases ATGTTTAAGAAACTTCGTGGCATGTTTTCAAACGATCTTTCAATCGATCTAGGTACTGCCAACACACTTATTTATGTAAA AGGTCAAGGCATCGTTCTTGATGAACCTTCTGTTGTTGCTATTCGTCAAGACCGTAATGGTTCAGCGAAAAGCGTAGCGG CTGTTGGTCACGAAGCAAAACGAATGCTAGGTCGTACTCCTGGTAATATTTCTGCTATCCGTCCAATGAAAGATGGCGTT ATCGCTGACTTTTACGTCACCGAAAAAATGTTGCAACACTTCATTAAGCAAGTGCACGACAACAGCTTCTTACGTCCAAG CCCACGCGTTCTTGTTTGTGTACCTTGTGGTTCTACGCAAGTTGAACGCCGTGCTATCCGTGAATCAGCTCAAGGTGCTG GTGCCCGTGAAGTCTTCCTAATTGATGAGCCTATGGCTGCTGCTATCGGCGCTGGCTTACCGGTATCTGAAGCGACCGGT TCTATGGTGGTTGATATAGGTGGTGGTACAACAGAAGTTGCCGTTATCTCACTGAACGGTGTGGTTTACTCATCGTCTGT TCGTATTGGTGGTGACCGTTTTGATGAAGCGATCATTAACTACGTACGTCGTAACTACGGTAGCCTTATTGGTGAAGCGA CGGCTGAGCGCATTAAGCACGAGATCGGTTCTGCATACCCTGGTGATGATGTCCTTGAAATTGAAGTACGTGGTCGTAAC CTTGCAGAAGGTGTTCCTCGTAGCTTTACACTAAATTCAAACGAAATCTTAGAAGCGCTTCAAGAGCCTCTTTCTGGTAT CGTTTCAGCAGTAATGGTTGCACTAGAACAGTGTCCACCAGAACTAGCATCTGATGTTTCAGAACACGGCATGGTATTAA CGGGTGGTGGTGCACTACTTCGTGATTTAGACCGTCTTTTGACTGAAGAAACTGGGATCCCAGTGGTTGTTGCAGAGAAT CCATTAACATGTGTTGCTCTTGGCGGCGGTAAAGCATTAGAAATGATCGATATGCACGGTGGCGATCTCTTTAGTGACGA GTAA
Upstream 100 bases:
>100_bases TGCTTCAGGATTCTGTAGCAATGCCTTGCTGATTAGGCTAGGCATTGGTACATTTAGATATATTTATCTTATTATCACGC TTTCAGGAAATACGAAGATT
Downstream 100 bases:
>100_bases TAATAATAACGGGTGAGTGGATATGACTCCAATCTTTGGTAGAGGTCCCTCTCTACAGCTTCGCCTGTTTATTGCTGTAA TGGTATCGGCTAGCCTTATG
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDRNGSAKSVAAVGHEAKRMLGRTPGNISAIRPMKDGV IADFYVTEKMLQHFIKQVHDNSFLRPSPRVLVCVPCGSTQVERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATG SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDDVLEIEVRGRN LAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPELASDVSEHGMVLTGGGALLRDLDRLLTEETGIPVVVAEN PLTCVALGGGKALEMIDMHGGDLFSDE
Sequences:
>Translated_347_residues MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDRNGSAKSVAAVGHEAKRMLGRTPGNISAIRPMKDGV IADFYVTEKMLQHFIKQVHDNSFLRPSPRVLVCVPCGSTQVERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATG SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDDVLEIEVRGRN LAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPELASDVSEHGMVLTGGGALLRDLDRLLTEETGIPVVVAEN PLTCVALGGGKALEMIDMHGGDLFSDE >Mature_347_residues MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDRNGSAKSVAAVGHEAKRMLGRTPGNISAIRPMKDGV IADFYVTEKMLQHFIKQVHDNSFLRPSPRVLVCVPCGSTQVERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATG SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDDVLEIEVRGRN LAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPELASDVSEHGMVLTGGGALLRDLDRLLTEETGIPVVVAEN PLTCVALGGGKALEMIDMHGGDLFSDE
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Homo sapiens, GI34419635, Length=375, Percent_Identity=25.8666666666667, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI87082236, Length=347, Percent_Identity=92.7953890489914, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI1788875, Length=247, Percent_Identity=25.1012145748988, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324120, Length=384, Percent_Identity=22.9166666666667, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319972, Length=384, Percent_Identity=22.3958333333333, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36900; Mature: 36900
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDRNGSAKSVAAVGHEAK CCHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHHHH RMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIKQVHDNSFLRPSPRVLVCVPCGSTQ HHHCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHH VERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG HHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEECC VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDDVLEIEVRGRN EEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCH LAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPELASDVSEHGMVLTGGGALL HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHH RDLDRLLTEETGIPVVVAENPLTCVALGGGKALEMIDMHGGDLFSDE HHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDRNGSAKSVAAVGHEAK CCHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHHHH RMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIKQVHDNSFLRPSPRVLVCVPCGSTQ HHHCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHH VERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG HHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEECC VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDDVLEIEVRGRN EEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCH LAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPELASDVSEHGMVLTGGGALL HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHH RDLDRLLTEETGIPVVVAENPLTCVALGGGKALEMIDMHGGDLFSDE HHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]