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The map label for this gene is mshI

Identifier: 209694063

GI number: 209694063

Start: 522657

End: 524120

Strand: Direct

Name: mshI

Synonym: VSAL_I0466

Alternate gene names: NA

Gene position: 522657-524120 (Clockwise)

Preceding gene: 209694062

Following gene: 209694064

Centisome position: 15.72

GC content: 36.54

Gene sequence:

>1464_bases
ATGAATATGATGGATGCATTCAAGAAACTGACACTTTCTCGTTCTATTAAAACAACGACATCAATTGTTCTATTACAAGG
TGGTATCTATATCGCGAAAAGCGATGATGATAACCAACTTAAAGAAAGTCATTATACTGAAATTAACCATCCGCAAGCTT
GGAAAGAAGCGTTAGTTAGTGCTTGCCAACAAGCTGGTGTTTCAGACTGTGGAGCCAATATAATTGTAGGCTCTCATCTT
TATCAGTCATTTCAAATTGAAAAACCGAATATTCCTAAAGAAGAGCTAATTGGTGCGCTTCCTTTTCTTGTTAAAGATCT
TATTACGGATCGCGTATCTGATATTGTTGCTGATGGCATTGAAACCAGTAATGGTAAATTGCAGGTATATATTTCTCAGA
TTGCCACGATAAAGTCTATTGTTGACCTCTTACAACCTTTCTCTATTCAAGTTATTAATATTACGCCTGATGAATTAACG
TGGGCAAATGCAAAACCAGAGCAAGATGGTTTTATGCTACTTTGCCACAGTAAATCAGCAGACTTTAAATTATTGGCGTT
TAATGAAGGGCGCTTACATTTAAATCGTTCTTTGCGCGGAATTAAAGCGCCTTTAACCGGCGATGAATCTAGTCACTTTC
AACTCGATAATTTAGCTTTAGAATTACAACGATCATTAGATTATTTAAGTGCTCACTCGCAAGGTGTCAATATTAATCAT
CTTTATTTTCGCTGTGATGATGAAGATGATTCAACGTTATCCACTGAGCTACAAAATCGTTTAGGGGTCAAGGTTGCCTC
ACTGCTTGTGGATGAACCAAGAGTCTTTAGAGCAGGGGAAGTGCTGAGTTGGCTAGGGTTATTTAATAAGCCAAATATTA
ATTTATATAATGATACCTTAAAACCGAAAACGGATTATTTAACATTACCCAATGCATTGATTAGTTGGGGAGTTGGTATG
GTTCTTGTAGGTATTATTGCAGGTTACTATCAATGGCAACTTTATGGCGTTGAAAATAAAGTCGCACTGGCATCATCTCA
AGAAAGTATCTACAACCAAGAGCTGATTGAAGTAAATAAAAAGTTGGCTGGGCATAAACCATCGGCCGCTAAATTGGCGG
CAATAAAGCGATTAAAAGACGATATTAACGCCAAGAAAGCATCATTAAAAATGATCGATAATTTTGATGAAGGGATGCAA
GTGGGGTACTCCGGTCTTATGAGTAGCCTTACTCAAATTGGTAAAGGGAATATCTCCCTAACAAAAATTTATATTTCTGG
TAATGACGTTAATTTTACTGGTTTTGCACGAACGCCAGATGTTGTACCTAGTTGGATACAGAGCTTTGAAAGTGAATTGC
ATTTAGTCGGTCGAACTTTTGCTCAATTAAACATAAAAACAGATGAAAAAGGGGTTGTGTCATTTACTTTAAATACAACC
GTGTCAAAGGAAAGTAATGAATAA

Upstream 100 bases:

>100_bases
TGTCTTAAGAATAGAATGTTGTATCATTCATGATTAATCCGTCGCGGAAAAAAAGACGGGTGTTCAGTGTAATGAAAGCA
ATATAGAGATTACGTAATTA

Downstream 100 bases:

>100_bases
TTGGATTAAAGCAAAAGACGCTTTCTTAGCGTTATCACAAAGAGAAAAAATGCTCATTGTTATTGTGGGTTGGGTTGCGG
TTATTTTTATTTCTTTAACG

Product: type IV pilus, mannose-sensitive hemagglutinin D (MSHI)

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshI; Fimbrial Assembly Family Protein; Msha Biogenesis Protein Mshi; Mannose-Sensitive Agglutininwith Frame Shift; MSHA Biogenesis; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHYTEINHPQAWKEALVSACQQAGVSDCGANIIVGSHL
YQSFQIEKPNIPKEELIGALPFLVKDLITDRVSDIVADGIETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELT
WANAKPEQDGFMLLCHSKSADFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALELQRSLDYLSAHSQGVNINH
LYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEVLSWLGLFNKPNINLYNDTLKPKTDYLTLPNALISWGVGM
VLVGIIAGYYQWQLYGVENKVALASSQESIYNQELIEVNKKLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGMQ
VGYSGLMSSLTQIGKGNISLTKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGRTFAQLNIKTDEKGVVSFTLNTT
VSKESNE

Sequences:

>Translated_487_residues
MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHYTEINHPQAWKEALVSACQQAGVSDCGANIIVGSHL
YQSFQIEKPNIPKEELIGALPFLVKDLITDRVSDIVADGIETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELT
WANAKPEQDGFMLLCHSKSADFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALELQRSLDYLSAHSQGVNINH
LYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEVLSWLGLFNKPNINLYNDTLKPKTDYLTLPNALISWGVGM
VLVGIIAGYYQWQLYGVENKVALASSQESIYNQELIEVNKKLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGMQ
VGYSGLMSSLTQIGKGNISLTKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGRTFAQLNIKTDEKGVVSFTLNTT
VSKESNE
>Mature_487_residues
MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHYTEINHPQAWKEALVSACQQAGVSDCGANIIVGSHL
YQSFQIEKPNIPKEELIGALPFLVKDLITDRVSDIVADGIETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELT
WANAKPEQDGFMLLCHSKSADFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALELQRSLDYLSAHSQGVNINH
LYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEVLSWLGLFNKPNINLYNDTLKPKTDYLTLPNALISWGVGM
VLVGIIAGYYQWQLYGVENKVALASSQESIYNQELIEVNKKLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGMQ
VGYSGLMSSLTQIGKGNISLTKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGRTFAQLNIKTDEKGVVSFTLNTT
VSKESNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53948; Mature: 53948

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHYTEINHPQAWKEALVS
CCHHHHHHHHHHHCCHHHHEEEEEEECCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHH
ACQQAGVSDCGANIIVGSHLYQSFQIEKPNIPKEELIGALPFLVKDLITDRVSDIVADGI
HHHHCCCCCCCCCEEECHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELTWANAKPEQDGFMLLCHSKSA
CCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCCCEEEEEECCCC
DFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALELQRSLDYLSAHSQGVNINH
CEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEE
LYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEVLSWLGLFNKPNINLYNDTL
EEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
KPKTDYLTLPNALISWGVGMVLVGIIAGYYQWQLYGVENKVALASSQESIYNQELIEVNK
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHH
KLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGMQVGYSGLMSSLTQIGKGNISL
HHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEE
TKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGRTFAQLNIKTDEKGVVSFTLNTT
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEEEEE
VSKESNE
ECCCCCC
>Mature Secondary Structure
MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHYTEINHPQAWKEALVS
CCHHHHHHHHHHHCCHHHHEEEEEEECCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHH
ACQQAGVSDCGANIIVGSHLYQSFQIEKPNIPKEELIGALPFLVKDLITDRVSDIVADGI
HHHHCCCCCCCCCEEECHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELTWANAKPEQDGFMLLCHSKSA
CCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCCCEEEEEECCCC
DFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALELQRSLDYLSAHSQGVNINH
CEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEE
LYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEVLSWLGLFNKPNINLYNDTL
EEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
KPKTDYLTLPNALISWGVGMVLVGIIAGYYQWQLYGVENKVALASSQESIYNQELIEVNK
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHH
KLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGMQVGYSGLMSSLTQIGKGNISL
HHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEE
TKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGRTFAQLNIKTDEKGVVSFTLNTT
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEEEEE
VSKESNE
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA