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The map label for this gene is mshJ

Identifier: 209694064

GI number: 209694064

Start: 524113

End: 524751

Strand: Direct

Name: mshJ

Synonym: VSAL_I0467

Alternate gene names: NA

Gene position: 524113-524751 (Clockwise)

Preceding gene: 209694063

Following gene: 209694065

Centisome position: 15.76

GC content: 34.43

Gene sequence:

>639_bases
ATGAATAATTGGATTAAAGCAAAAGACGCTTTCTTAGCGTTATCACAAAGAGAAAAAATGCTCATTGTTATTGTGGGTTG
GGTTGCGGTTATTTTTATTTCTTTAACGCTAGTCATAGAACCTCAAATGGCGAAAACGCAAAAAGCGGAACAACAACTGT
CTCGAGTGACGAATTCTATTTCATCATTAAAACAACAAATTGAATTAGCTCAATTTCGATTGCAAAAAGATCCAAACCTT
GAAATTAATAAAGAATATAAAGAGCTAACGTTACAAAGCCAAGATTTAGCGAATATTTTATCTAAACGGGTTGCTGCTTT
AGTTTCGCCAAGTCAAATGGCACAGTTACTTGAAACCGTATTACAAAAATCATCAAAATTAAGATTGAGTTCGATGAGTA
CATTACCGTCTGAGCGATTATTAGATGAGAACAGTAACGCTGGCTATTACATTCACCCGATTAAGCTTGTGCTTTCGGGG
AGTTATTTTGATTTTGAAGAATACCTTTCAAATTTAGAATCATTGCCCGTGAAATATTATTGGAGAAACTTTCAATATAA
AGTGAAAACATACCCAAATGCTGAGTTAAGTATTGAGGTATACACCCTCGGTTCAAGTAAAGGGTTCATTGGAGGTTAA

Upstream 100 bases:

>100_bases
TTGCATTTAGTCGGTCGAACTTTTGCTCAATTAAACATAAAAACAGATGAAAAAGGGGTTGTGTCATTTACTTTAAATAC
AACCGTGTCAAAGGAAAGTA

Downstream 100 bases:

>100_bases
TGTGAAATATTTCCTTTTATTATTTGTATTATTAGCATCGTCGATTAATGCATCAGAAATCAGTGCGGGACACGATCCTA
CAGAGCCATTAAGTTGGTTG

Product: type IV pilus, mannose-sensitive hemagglutinin D (MSHJ)

Products: NA

Alternate protein names: Mannose-Sensitive Agglutinin; Mannose-Sensitive Agglutinin Biogenesis Protein MshJ; Glucose-6-Phosphate Isomerase; Msha Biogenesis Protein Mshj; Type II Secretory Pathway Component; MshA Biogenesis Protein MshJ-Like Protein; MshA Biogenesis Protein MshJ-Like; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAKTQKAEQQLSRVTNSISSLKQQIELAQFRLQKDPNL
EINKEYKELTLQSQDLANILSKRVAALVSPSQMAQLLETVLQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSG
SYFDFEEYLSNLESLPVKYYWRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG

Sequences:

>Translated_212_residues
MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAKTQKAEQQLSRVTNSISSLKQQIELAQFRLQKDPNL
EINKEYKELTLQSQDLANILSKRVAALVSPSQMAQLLETVLQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSG
SYFDFEEYLSNLESLPVKYYWRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG
>Mature_212_residues
MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAKTQKAEQQLSRVTNSISSLKQQIELAQFRLQKDPNL
EINKEYKELTLQSQDLANILSKRVAALVSPSQMAQLLETVLQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSG
SYFDFEEYLSNLESLPVKYYWRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24163; Mature: 24163

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAKTQKAEQQLSRVTNSI
CCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSLKQQIELAQFRLQKDPNLEINKEYKELTLQSQDLANILSKRVAALVSPSQMAQLLETV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSGSYFDFEEYLSNLESLPVKYY
HHHHCCCCHHHHHCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEE
WRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG
EECEEEEEEECCCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAKTQKAEQQLSRVTNSI
CCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSLKQQIELAQFRLQKDPNLEINKEYKELTLQSQDLANILSKRVAALVSPSQMAQLLETV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSGSYFDFEEYLSNLESLPVKYY
HHHHCCCCHHHHHCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEE
WRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG
EECEEEEEEECCCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA