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The map label for this gene is ssb [H]

Identifier: 209694058

GI number: 209694058

Start: 517928

End: 518479

Strand: Direct

Name: ssb [H]

Synonym: VSAL_I0461

Alternate gene names: 209694058

Gene position: 517928-518479 (Clockwise)

Preceding gene: 209694044

Following gene: 209694062

Centisome position: 15.58

GC content: 45.47

Gene sequence:

>552_bases
ATGGCCAGCCGTGGTATTAATAAAGTTATCCTTGTTGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCAAGTGG
CGGTGCGGTAGCAAACATTACAATTGCAACGTCGGAATCATGGCGTGATAAAGCAACTGGCGAACAACGTGAAAAAACAG
AATGGCACCGTGTTGCTCTGTTTGGTAAATTAGCGGAAGTTGCTGGTGAGTATTTACGTAAAGGCTCTCAAGTTTATGTT
GAAGGTCAATTACAAACACGTAAATGGCAAGATCAGAGCGGTCAAGATCGTTTTACTACAGAAGTTGTAGTTCAAGGTTT
TAACGGTGTAATGCAGATGCTTGGTGGTCGTGGTCAAGGTCAAGGCGCTCCAGCTGGTGGACAGCAGCAACAGCAGCAAG
GCAATTGGGGTCAACCTCAACAACCTGCGCAGCAAAATAACTTTGCTCCACAACAGCAGCAACAACAAGCACCTCAACAA
CAAGCACCGCAGGCAGCTCAGCCTCAATATAATGAGCCACCAATGGACTTTGATGATGATATTCCATTTTAG

Upstream 100 bases:

>100_bases
AGGGGTATCAGAAATAGTGATGAACGTGTTAAACTGCGAACTACTGTATATATAACCGGGTGAACACTTTTCATCCTTTC
TAATTTATCTGGAGCAAACT

Downstream 100 bases:

>100_bases
GAATATATCTTTAATTGTTTCATAAAAAAAAGCCTCAATCATTGAGGCTTTTTTTGTAGGCGGAAGAAGTAATTATTTCT
TAATTGTCATGGTTAAATTA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQGQGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQ
QAPQAAQPQYNEPPMDFDDDIPF

Sequences:

>Translated_183_residues
MASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQGQGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQ
QAPQAAQPQYNEPPMDFDDDIPF
>Mature_182_residues
ASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYVE
GQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQGQGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQQ
APQAAQPQYNEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.0275229357798, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1790494, Length=183, Percent_Identity=71.5846994535519, Blast_Score=238, Evalue=1e-64,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20226; Mature: 20094

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVAL
CCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQQAPQAAQPQYNEPPMDFDDD
CCCCCCCCHHHHCCCCCCCCCCCHHCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
IPF
CCC
>Mature Secondary Structure 
ASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVAL
CCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRFTTEVVVQGFNGVMQMLGGRGQG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQQAPQAAQPQYNEPPMDFDDD
CCCCCCCCHHHHCCCCCCCCCCCHHCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
IPF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9973335; 10952301 [H]