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The map label for this gene is ytfJ [H]

Identifier: 209694031

GI number: 209694031

Start: 465991

End: 466542

Strand: Reverse

Name: ytfJ [H]

Synonym: VSAL_I0430

Alternate gene names: 209694031

Gene position: 466542-465991 (Counterclockwise)

Preceding gene: 209694033

Following gene: 209694030

Centisome position: 14.03

GC content: 37.86

Gene sequence:

>552_bases
ATGAAAAAGATCACCCTACTTACTCTTGCCGCTTGCTTATTACCAACACTCGGTTTTGCTCATAACATTACATTGAACAA
AACAGTACCTACTGTTTCCATTGATAATTACGGTGAAATCTTTTTTGAAGATTCCGCGGCAACCTATCAACCTTGGGATT
CAGAACAGTTAAAAGGTAAGGTTCGAGTATTACAAGCGATTGCTGGTCGAAGTAGCGCTAAAGCAATGAATACTGAGCTT
ATGAGTGCCATTACATTAGAAAAGTTCCCTGAAACACAATATCAAACGACAACGATTATTAATCAAGACGATTCCATTTG
GGGTACTGGGGGATTTGTAAAGTCCTCTGCTGAAGAAAGTAAAGAAGAGTTCTCATGGTCTTCGATGGTTCTTGATGAAA
ATGGAACCGCAGCAAAAACGTGGGATCTTCAGCCAGAAAGCTCTGCAATTATCGTTCAAAATAAAGAAGGTAATGTTCTT
TTTGTGAAAGAAGGAAAATTAACATCTGACGAAATCAAGCAAGTTATCTCATTAATTCACGCTCAATTGTAA

Upstream 100 bases:

>100_bases
ACTGTTTATTAACCAATATTCATTTATAAGAAAACTGGTCGAATCGCTTTTTAAGCACTGCTGAACTAAACTACATCAAC
AATTTCTAAGGATAACTAAA

Downstream 100 bases:

>100_bases
ACAAATTACTTGCTTATAAAATGTTATATTATTACATTTACTACTCATTCAATTAGGGCAGTATAATGCAATCGTATTTC
TTTACTAAACAGCGCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDSAATYQPWDSEQLKGKVRVLQAIAGRSSAKAMNTEL
MSAITLEKFPETQYQTTTIINQDDSIWGTGGFVKSSAEESKEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVL
FVKEGKLTSDEIKQVISLIHAQL

Sequences:

>Translated_183_residues
MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDSAATYQPWDSEQLKGKVRVLQAIAGRSSAKAMNTEL
MSAITLEKFPETQYQTTTIINQDDSIWGTGGFVKSSAEESKEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVL
FVKEGKLTSDEIKQVISLIHAQL
>Mature_183_residues
MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDSAATYQPWDSEQLKGKVRVLQAIAGRSSAKAMNTEL
MSAITLEKFPETQYQTTTIINQDDSIWGTGGFVKSSAEESKEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVL
FVKEGKLTSDEIKQVISLIHAQL

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0045 [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=178, Percent_Identity=44.9438202247191, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 20164; Mature: 20164

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDSAATYQPWDSEQLKGK
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHH
VRVLQAIAGRSSAKAMNTELMSAITLEKFPETQYQTTTIINQDDSIWGTGGFVKSSAEES
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCHHHH
KEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVLFVKEGKLTSDEIKQVISLIH
HHHCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
AQL
HCC
>Mature Secondary Structure
MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDSAATYQPWDSEQLKGK
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHH
VRVLQAIAGRSSAKAMNTELMSAITLEKFPETQYQTTTIINQDDSIWGTGGFVKSSAEES
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCHHHH
KEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVLFVKEGKLTSDEIKQVISLIH
HHHCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
AQL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7764507; 9298646; 10493123 [H]