Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694030
Identifier: 209694030
GI number: 209694030
Start: 465635
End: 465925
Strand: Reverse
Name: 209694030
Synonym: VSAL_I0429
Alternate gene names: NA
Gene position: 465925-465635 (Counterclockwise)
Preceding gene: 209694031
Following gene: 209694029
Centisome position: 14.01
GC content: 37.46
Gene sequence:
>291_bases ATGCAATCGTATTTCTTTACTAAACAGCGCTGGTTAAATTGGAGTTTAGTCATACTTCTCGCGCTGTTTGGTATTTTGGT TGCTAATCATCAAATTGATACCAATATACAGCACCATGAAAATCACCATTGCCAAATGTTCCACTCCATTGGGTCAGGAA TTACTGCCCATGTTGCTTCTCTTCCAATAATCCCTCAATTAATAATATCGTCTACATTTACTAGTGTAGAAAATAGTAAC CCTTCATCTATCACCGTACATTCACGTGCGCCTCCTTTTTCTATTCTCTAA
Upstream 100 bases:
>100_bases AGCAAGTTATCTCATTAATTCACGCTCAATTGTAAACAAATTACTTGCTTATAAAATGTTATATTATTACATTTACTACT CATTCAATTAGGGCAGTATA
Downstream 100 bases:
>100_bases CTCAATAAATACATTAATTCATTTATAACTCTTAGATAATAGGAAGCCATTATGCTTATCCGTAATAAAAAAATACTACT TAGCCTTGCCATTTCAAGTT
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQMFHSIGSGITAHVASLPIIPQLIISSTFTSVENSN PSSITVHSRAPPFSIL
Sequences:
>Translated_96_residues MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQMFHSIGSGITAHVASLPIIPQLIISSTFTSVENSN PSSITVHSRAPPFSIL >Mature_96_residues MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQMFHSIGSGITAHVASLPIIPQLIISSTFTSVENSN PSSITVHSRAPPFSIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10790; Mature: 10790
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQMFHSIGSGITAHVAS CCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH LPIIPQLIISSTFTSVENSNPSSITVHSRAPPFSIL CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQMFHSIGSGITAHVAS CCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH LPIIPQLIISSTFTSVENSNPSSITVHSRAPPFSIL CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA