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The map label for this gene is 209694027

Identifier: 209694027

GI number: 209694027

Start: 462963

End: 464222

Strand: Reverse

Name: 209694027

Synonym: VSAL_I0426

Alternate gene names: NA

Gene position: 464222-462963 (Counterclockwise)

Preceding gene: 209694028

Following gene: 209694026

Centisome position: 13.96

GC content: 39.92

Gene sequence:

>1260_bases
ATGGTAGGCATTTTGCAATTGGCTTGGAAAAGCCTTAAAAACCGTAAGACCACGGTATTACTTACTGTTGCTACTATCGC
TATCTCTGTCATGTTATTAGTCGGTGTTGAACGTATTCGTACCCAAGCTAAAACAAGCTTTGCAAATACCATATCAAACA
CAGATTTAATTGTTGGCGCACGTTCAGGTCAAGTGAACCTCTTGCTTTACTCTGTTTTTCGCATTGGTAACGCGACAAAT
AATATTGATTGGAAAAGCTATCAAGAAATAATCAGCCAGCGGGCAGTGAAATGGTCAATACCAATCTCTCTTGGAGATTC
CCATAAAGGATTTCGAGTCATGGGAACGAATCAAGATTATTTTCGCTTTTATCAATATGGAAAAAAACAACCACTGGCTT
TTAAAGAAGGAAAGCCATTCGACGACCTATTTGATGTCGTATTAGGCGCCGATGTGGCACAAAAATTAAATTATCATTTA
GGTGATAAGCTCGTTATTGCTCATGGTATTAGTGATAAATCATTTACCCGTCACGATAAGCTGCCCTTTACGGTTGTTGG
TATTTTAAAGCCAACAGGGACGCCAGTAGACAAAACGTTACATGTGTCTTTAGGTGCAATTTCTGCCATCCATGTTGGAT
GGGAAAGCGGTGCGCACTTAGGAAATACACCCGATGCTAAAATATTAGAAAAACAAAAATTTGAACCCACCGAAATTACG
GCATTTATGCTTGGTCTAAAATCAAAAATTCAAACATTTGCATTGCAGCGCTACATTAACGACTATACCAAAGAACCACT
CAGTGCCATTTTACCAGGTATTGCTTTACACGAATTATGGGGAATGATGTCAGTTGCTGAGCAAGCGCTATTAGCTGTTT
CTATTTTTGTGGTTGCCGCAGGATTAATGGGAATGCTCACCAGCCTACTCACTAGCCTTCAAGAGCGACGCCGAGAAATG
GCCATTTTAAGAGCGATGGGAGCGCAGCCTAAACATATTTTTATATTATTAGTAAGCGAAGCCGTTGTCATTACAAGCTT
TGGGATCATCGTAGGCCTAATAGGTCTTTACCTCTCATTAAGCATATTGCAGCCAATCATTCAGCAGTATTACGGCATTG
CGATAGAGCTCACCTTACCCACACTTTATGAATTAAAATTACTCGCACTCGTCTTGTGCTCTGGTTTTATTATTGGTGTT
ATTCCAGCAATACAAGCGTATCGCCACTCATTAAGTGATGGTATGACAATAAGACTTTAA

Upstream 100 bases:

>100_bases
GTCAGGCTAGCTTGTTATTTGTCAGTCATGACCCAAGTTTAGAGTCTTTATTTGATCAAAGTATTGATTTAAGAACCTTA
AACACCGCGGGAGAATACTC

Downstream 100 bases:

>100_bases
GGATAAATAATGAAAAAGAAACTCTTACTTTGCTTATTATTACTTTTGCCCTTTAGTGCATTTAGTGATGAGGTATTGAA
ATTAGATTGGATTGATTTAG

Product: predicted permease

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transport System Permease Component; Peptide ABC Transporter Permease Component; Transmembrane Protein; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKTSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIISQRAVKWSIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHL
GDKLVIAHGISDKSFTRHDKLPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGNTPDAKILEKQKFEPTEIT
AFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWGMMSVAEQALLAVSIFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLVSEAVVITSFGIIVGLIGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIGV
IPAIQAYRHSLSDGMTIRL

Sequences:

>Translated_419_residues
MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKTSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIISQRAVKWSIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHL
GDKLVIAHGISDKSFTRHDKLPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGNTPDAKILEKQKFEPTEIT
AFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWGMMSVAEQALLAVSIFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLVSEAVVITSFGIIVGLIGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIGV
IPAIQAYRHSLSDGMTIRL
>Mature_419_residues
MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKTSFANTISNTDLIVGARSGQVNLLLYSVFRIGNATN
NIDWKSYQEIISQRAVKWSIPISLGDSHKGFRVMGTNQDYFRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHL
GDKLVIAHGISDKSFTRHDKLPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGNTPDAKILEKQKFEPTEIT
AFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWGMMSVAEQALLAVSIFVVAAGLMGMLTSLLTSLQERRREM
AILRAMGAQPKHIFILLVSEAVVITSFGIIVGLIGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIGV
IPAIQAYRHSLSDGMTIRL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46182; Mature: 46182

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00358 RIBOSOMAL_L5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKTSFANTISNTDLIVGA
CCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RSGQVNLLLYSVFRIGNATNNIDWKSYQEIISQRAVKWSIPISLGDSHKGFRVMGTNQDY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCCHHH
FRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHLGDKLVIAHGISDKSFTRHDK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
LPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGNTPDAKILEKQKFEPTEIT
CCEEEEEEECCCCCCCCCEEEEEHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHH
AFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWGMMSVAEQALLAVSIFVVAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMGMLTSLLTSLQERRREMAILRAMGAQPKHIFILLVSEAVVITSFGIIVGLIGLYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
SILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIGVIPAIQAYRHSLSDGMTIRL
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKTSFANTISNTDLIVGA
CCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
RSGQVNLLLYSVFRIGNATNNIDWKSYQEIISQRAVKWSIPISLGDSHKGFRVMGTNQDY
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCCHHH
FRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHLGDKLVIAHGISDKSFTRHDK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
LPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGNTPDAKILEKQKFEPTEIT
CCEEEEEEECCCCCCCCCEEEEEHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHH
AFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWGMMSVAEQALLAVSIFVVAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMGMLTSLLTSLQERRREMAILRAMGAQPKHIFILLVSEAVVITSFGIIVGLIGLYLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
SILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIGVIPAIQAYRHSLSDGMTIRL
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA