| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cysH
Identifier: 209694005
GI number: 209694005
Start: 442904
End: 443665
Strand: Direct
Name: cysH
Synonym: VSAL_I0404
Alternate gene names: 209694005
Gene position: 442904-443665 (Clockwise)
Preceding gene: 209694004
Following gene: 209694008
Centisome position: 13.32
GC content: 40.03
Gene sequence:
>762_bases ATGCCTAAATTGCAACTGTCAGAGCTGCTGTCATTAAATAAAGTCGAGCAAATTTTACGCTTAGCTGAAATTAATACCGA GCTTGAACAACTGACGGCTCAAGAGCGAGTTTCTTGGGCTTTAGATAATCTAGAAGGTAAACCTGCAGTTTCTTCAAGCT TTGGAATTCAGGCCGCGGTAATGTTGCAATTAGTCACGGACGTTAAGTCTGATACGCCTGTAATTTTAACGGACACTGGG TATCTTTTTCCTGAAACGTACCAATTTATTGATACATTGACGGAGCGTCTGAACTTGAATTTACAAGTATTTACAGCAGA TGAAACTCCCATGTGGCAAGAAGCACGCTACGGAAAGTTATGGGAGCAGGGCGTCGATGGACTTAAACATTATAACCGTT TAAATAAAGTTCAGCCGATGCGAAGAGCATTAGATCAACTTCAAGTGGGTGTTTGGTTCTCGGGATTACGTCGTGATCAA TCAAGTTCTCGTTCACATTTGCCTATTTTAAGTATTCAAAATGGGGTATTTAAATTTCTACCGGTTATCGATTGGAGTAA TCAAGAGGTGCACTATTATTTGGAAGAGAAAGGATTACCTTATCATCCATTAAGAGACGAAGGATATTTGTCTGTTGGTG ATACACATACAACTCAGAAATGGGAACCGGGAATGAAAGAAGAAGACACTCGATTTTTTGGATTAAAGAGAGAGTGTGGG TTACATGAAGATGATGCTGAAGCGGAAGGCTCTGGAATTTAA
Upstream 100 bases:
>100_bases GGTCGTTGGGCAACTGAGCGTCAAGAGAATGAAGGCTTTGGTGATTTTACCATTCGAGCCGGAATTGTGGATGAAGTGAA AGTATCAAAAAGGGACTTTT
Downstream 100 bases:
>100_bases TTTTTCTTTCTATCGTCGATAAAAATAAAAAGACAGCGATTATTCACTGTCTTTTTTTATTTCTCTTAAAAAGAAATTAT TTCCATAATGAAGTCAGAGA
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLEGKPAVSSSFGIQAAVMLQLVTDVKSDTPVILTDTG YLFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKLWEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQ SSSRSHLPILSIQNGVFKFLPVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMKEEDTRFFGLKRECG LHEDDAEAEGSGI
Sequences:
>Translated_253_residues MPKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLEGKPAVSSSFGIQAAVMLQLVTDVKSDTPVILTDTG YLFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKLWEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQ SSSRSHLPILSIQNGVFKFLPVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMKEEDTRFFGLKRECG LHEDDAEAEGSGI >Mature_252_residues PKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLEGKPAVSSSFGIQAAVMLQLVTDVKSDTPVILTDTGY LFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKLWEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQS SSRSHLPILSIQNGVFKFLPVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMKEEDTRFFGLKRECGL HEDDAEAEGSGI
Specific function: Reduction of activated sulfate into sulfite
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily
Homologues:
Organism=Escherichia coli, GI1789121, Length=243, Percent_Identity=67.0781893004115, Blast_Score=348, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6325425, Length=227, Percent_Identity=32.15859030837, Blast_Score=109, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSH_ALISL (B6ELM6)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002261933.1 - GeneID: 6988377 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0404 - HOGENOM: HBG758022 - OMA: TNFRPYE - ProtClustDB: PRK02090 - GO: GO:0005737 - HAMAP: MF_00063 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00434 - TIGRFAMs: TIGR02057
Pfam domain/function: PF01507 PAPS_reduct
EC number: =1.8.4.8
Molecular weight: Translated: 28999; Mature: 28868
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLEGKPAVSSSFGIQAAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH MLQLVTDVKSDTPVILTDTGYLFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKL HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH WEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQSSSRSHLPILSIQNGVFKFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEH PVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMKEEDTRFFGLKRECG EEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCHHHCC LHEDDAEAEGSGI CCCCCCCCCCCCC >Mature Secondary Structure PKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLEGKPAVSSSFGIQAAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH MLQLVTDVKSDTPVILTDTGYLFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKL HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH WEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQSSSRSHLPILSIQNGVFKFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEH PVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMKEEDTRFFGLKRECG EEEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCHHHCC LHEDDAEAEGSGI CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA