Click here to switch to the map view.

The map label for this gene is 209693997

Identifier: 209693997

GI number: 209693997

Start: 433433

End: 434509

Strand: Reverse

Name: 209693997

Synonym: VSAL_I0396

Alternate gene names: NA

Gene position: 434509-433433 (Counterclockwise)

Preceding gene: 209693998

Following gene: 209693994

Centisome position: 13.07

GC content: 36.03

Gene sequence:

>1077_bases
ATGGAGTTCAAACATATGTCACAACAAATCCAAAACTTAGAACTAAACACTAAAAACCATTTAGAACGCTTTGGAACCCT
TCTTTTTTCTATAGGTTCAAAAGGTTATGACTGCGTTGCAAATTGGCTTGTTCACGATCTAATACCATCATCCTCATTTG
GCATTATCTATGGTGCCAGTGGATCTCTCAAATCATTTCTAGCAATAGATCTGTGCTGCTCTATCACAAGAGGAAATCAT
TGGAATTATCATGCTGTTAAAAAAGGAGCCGTTGTTTATGTAGCAGCAGAAGGACAGATGGGTGTAGCTAAACGTATTAA
AGCCTGTGAAATAGCTAACTCTATCAAAACTGAACATCTCTATGTTTTAGGGCACAGCCTTACAATGTCCGAAGAATCAA
ATCAAGAAGCTCTTATCACTGCAATACAAGAAATAGAACAAACAAGAAATGTAAAAGTACAGCTAGTTGTTCTAGATACT
CTTGCACGATGCTATTCAGGAGATGAAAACACATCACGTGATATGTCAGCTTTTGTTCACGGTTGTGACATAGTTAGAGC
GGTGACAGATACTACAATACTATGTATCCACCACTCAGGTCGTGACGAAGCTAAAGGAGCTCGAGGAAGTTCAGCACTAA
AGGCCGCTTGTGATTTTGAATTTCACGTAAAACGAACTGGAAAATCAAAACTTCTTACCTTTACAAATACTAAACAAAAA
GATGGAGAAGAAGCTCCTAATATGGAAGTAGAATTTGATTCTATCGAACTTGGAATTAATGATGTAAACGGGAAAGCACT
AACTTCTCTAGCTCTAATAAAATCAGTAGTACAGCAACATAATCTCATTGTTTCAGACAACCCAGTAATTAAAGCTCTAC
AAGAAAATTCTATTTCTAAAATAAAAAGAACCCACTTAAAAGAAATGCTTTTCCCAAATACAACTATGAATGTAGCACAG
CGTAAATCACTCAGTCGCTGGTTGAAAAACTTAGAATCCGATGGGAAAATTCTAATCGAAAAAATATCTATTCAAAAATC
ATCGCCTGACGATATGATTGTAAATTTGCTCCATTAA

Upstream 100 bases:

>100_bases
AGATATAAATATTTTGATGAATATATATTTACGACTAAAAGTATCTCCAGAGAGACTTCTAGTTGCTTAGTTAATATCAA
TGAAGAAAAAATCATAAAAA

Downstream 100 bases:

>100_bases
TTAGATAGTTGTGACCGTGTGACACTCCGAAGGAGTGTCACACGGTCACAACATCTAACTCATTACGAACACATCTAAGC
CATCAAATAAATATCCCTAT

Product: phage protein

Products: NA

Alternate protein names: Helicase; ATPase-Like Protein; Regulatory Prophage Protein; TOPRIM Domain Protein; DNA Primase; DNAB Domain Protein Helicase Domain Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVHDLIPSSSFGIIYGASGSLKSFLAIDLCCSITRGNH
WNYHAVKKGAVVYVAAEGQMGVAKRIKACEIANSIKTEHLYVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDT
LARCYSGDENTSRDMSAFVHGCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFHVKRTGKSKLLTFTNTKQK
DGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHNLIVSDNPVIKALQENSISKIKRTHLKEMLFPNTTMNVAQ
RKSLSRWLKNLESDGKILIEKISIQKSSPDDMIVNLLH

Sequences:

>Translated_358_residues
MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVHDLIPSSSFGIIYGASGSLKSFLAIDLCCSITRGNH
WNYHAVKKGAVVYVAAEGQMGVAKRIKACEIANSIKTEHLYVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDT
LARCYSGDENTSRDMSAFVHGCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFHVKRTGKSKLLTFTNTKQK
DGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHNLIVSDNPVIKALQENSISKIKRTHLKEMLFPNTTMNVAQ
RKSLSRWLKNLESDGKILIEKISIQKSSPDDMIVNLLH
>Mature_358_residues
MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVHDLIPSSSFGIIYGASGSLKSFLAIDLCCSITRGNH
WNYHAVKKGAVVYVAAEGQMGVAKRIKACEIANSIKTEHLYVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDT
LARCYSGDENTSRDMSAFVHGCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFHVKRTGKSKLLTFTNTKQK
DGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHNLIVSDNPVIKALQENSISKIKRTHLKEMLFPNTTMNVAQ
RKSLSRWLKNLESDGKILIEKISIQKSSPDDMIVNLLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39701; Mature: 39701

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVHDLIPSSSFGIIYGAS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECC
GSLKSFLAIDLCCSITRGNHWNYHAVKKGAVVYVAAEGQMGVAKRIKACEIANSIKTEHL
CCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEE
YVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDTLARCYSGDENTSRDMSAFVH
EEEECEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHH
GCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFHVKRTGKSKLLTFTNTKQK
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCEEEEEECCCCC
DGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHNLIVSDNPVIKALQENSISK
CCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHH
IKRTHLKEMLFPNTTMNVAQRKSLSRWLKNLESDGKILIEKISIQKSSPDDMIVNLLH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHEECC
>Mature Secondary Structure
MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVHDLIPSSSFGIIYGAS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECC
GSLKSFLAIDLCCSITRGNHWNYHAVKKGAVVYVAAEGQMGVAKRIKACEIANSIKTEHL
CCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEE
YVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDTLARCYSGDENTSRDMSAFVH
EEEECEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHH
GCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFHVKRTGKSKLLTFTNTKQK
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCEEEEEECCCCC
DGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHNLIVSDNPVIKALQENSISK
CCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHH
IKRTHLKEMLFPNTTMNVAQRKSLSRWLKNLESDGKILIEKISIQKSSPDDMIVNLLH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA