The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693868

Identifier: 209693868

GI number: 209693868

Start: 306147

End: 307148

Strand: Reverse

Name: 209693868

Synonym: VSAL_I0260

Alternate gene names: NA

Gene position: 307148-306147 (Counterclockwise)

Preceding gene: 209693869

Following gene: 209693851

Centisome position: 9.24

GC content: 35.03

Gene sequence:

>1002_bases
ATGAATGTTTTTCTTGTGACATCCCCCTTTCAATATATTTGTGCAAATGAAGCAAGATGTCATTATGCGACTAATGATAA
TATCCTCCTGCTTGTAAAACAAGATATGGAGCCCGCAATTAGCCAAATGACAAAGATTGTTAATGAAAATGATTGGACGC
ATGTGATTAATATTGAGCGAAGCCAACGAACATTCTCAATGCCGAAGGCCATCAAAGCGGTCAATAAGATAAGAACGAAT
AGCTCTATTAAGCACTTTTTTCATGGCGAATATAACGGATGGCGAACCAAATTTCTGTTACGTAACTTGAAACCTGATAC
TGAAATTTATTTCGATGATGGTTCGTTAACTTTAGGGGAATATGAGCGCTTTATCAAAACAGAGCACACTTTCTATCGCC
CACGATTTGTAAATGATCTGATAATAAAAATGCAGGGACTAAAGCCTATTGGTCGACTACCCATTTCTAAAAAGTTAGAG
ATTTTCACAATTTTTGATATAAAGGATCCCACGGTGCCAGTTGTCAAAAATGATTTTTCTAACATGAGAGAAACATATAA
TTTGAATGACGATCACCAGCGCGAACATTCTAATGAATACGCTCTCTTCTTAGGCCAAGGTAGCATTGATTGTCATGGGA
CAATTAAGTCTTTCTACTTAGATGCAATTAAGCGTTTTGCTAAAACTACAGGAAAGAAAATCTTATATGCACCTCATCGT
ACAGAAACTTCAGATATCCGCAAAGAAATTTTGAAGATTGAAAACTTGACGTATCACGATTCAACACTACCTATTGAATT
AGAAATTGCAGAAAAGCAACTAAATATCAACAACATAGGCGGGATAGCATCTACAGCACTGTACACTTTAAAAATCATTT
ACCCTCATATAAAAATATATTCTGCAAAACAGTCTAAAGAAGAATATCATACACAGGTAACTTATACTGACAATGAGCTG
ATGCTTGAACTCTTAAAATCTATTGGCATTGAATTATTCTAA

Upstream 100 bases:

>100_bases
GTTCAAAGTAATCAAGGTGCTTTAAATCGTACGATCGCTATCTCAAATATATAATCACGATTATCAGTAGTCATATCTAA
ATTAAATAAGGTTAATTTTC

Downstream 100 bases:

>100_bases
TCGAGTAGAAGGAGGCCTCTAACAATGAGTACTGTCCCTGCTCTTCGAACCATTTTATTGTAATCGTCTAATTTAAGTTC
AGAACCATTAAAAAATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTKIVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTN
SSIKHFFHGEYNGWRTKFLLRNLKPDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLE
IFTIFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDAIKRFAKTTGKKILYAPHR
TETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGGIASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNEL
MLELLKSIGIELF

Sequences:

>Translated_333_residues
MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTKIVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTN
SSIKHFFHGEYNGWRTKFLLRNLKPDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLE
IFTIFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDAIKRFAKTTGKKILYAPHR
TETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGGIASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNEL
MLELLKSIGIELF
>Mature_333_residues
MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTKIVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTN
SSIKHFFHGEYNGWRTKFLLRNLKPDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLE
IFTIFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDAIKRFAKTTGKKILYAPHR
TETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGGIASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNEL
MLELLKSIGIELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38813; Mature: 38813

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTKIVNENDWTHVINIER
CEEEEEECCHHHEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEC
SQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLKPDTEIYFDDGSLTLGE
CCCHHCCHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHCCCCCCEEEECCCCEEHHH
YERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFTIFDIKDPTVPVVKNDFS
HHHHHHCCCCEECCHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCHH
NMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDAIKRFAKTTGKKILYAPHR
HHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
TETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGGIASTALYTLKIIYPHIKIY
CCHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHEEEEEEEEEEEE
SAKQSKEEYHTQVTYTDNELMLELLKSIGIELF
ECHHCHHHHCEEEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTKIVNENDWTHVINIER
CEEEEEECCHHHEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEC
SQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLKPDTEIYFDDGSLTLGE
CCCHHCCHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHCCCCCCEEEECCCCEEHHH
YERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFTIFDIKDPTVPVVKNDFS
HHHHHHCCCCEECCHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCHH
NMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDAIKRFAKTTGKKILYAPHR
HHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
TETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGGIASTALYTLKIIYPHIKIY
CCHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHEEEEEEEEEEEE
SAKQSKEEYHTQVTYTDNELMLELLKSIGIELF
ECHHCHHHHCEEEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA