Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 209693723

GI number: 209693723

Start: 134738

End: 136618

Strand: Reverse

Name: yhcV [H]

Synonym: VSAL_I0100

Alternate gene names: 209693723

Gene position: 136618-134738 (Counterclockwise)

Preceding gene: 209693726

Following gene: 209693722

Centisome position: 4.11

GC content: 40.99

Gene sequence:

>1881_bases
ATGGAAGTTGAACTGTTAGAGATCCAACATTTTTTATCTCAATACCCTCCATTCAGTTTATTACCTGAAGAGGCGATAAA
AGAAGCCGCCCAAAGCGTTGAAATTTCTTATTACCGTGCAGAGAGTATGGTAATTGGCTTTGGTGATGAGATCAAAGACC
TCTACATGGTTCGCAGTGGGATTATAGAAGTCTATCGTCGTAACGGGGAGCTCTATAACCGACTGGATCAAGGCAGTATT
TTTGGTCAAATGGGCTTATTAATGAATAATAAAGTTCGTTTCCCAGCCAAAGCACTTAAAGATTCTCTTCTTTATTGTAT
ACCTGAATCTGTATTTGATGATTATTGTGAACGTTATGATGAATTCTCAGATTTCGTTGAAGTGGAAGATGCCACTCGTC
TAAAGCAAGCCGTTGAAAGTAATCATGATGACGCCAATGATTTAACGACATCAAAAGTAAAAACATTGCTGACTCGTGAA
GCAGTCATGATCACCAAATATGAAACCATTCAATCTGCCGCAAAAACCATGGCAGAAGAGAATGTCTCAGCGGTTTTAAT
TACCGATCCAGAAATCAATACCGATGAAGAAGATAACGACTTTGTTGGCATTATTACTGACCGTGATTTATGCACCAAAG
TCCTCGCCTGCGGACTAGATTTTGATACTCCGGTTTCAGAAGTCATGTCGACAGAGCTGATTTCACTCGATCACAACGCT
TATGTATTTGAAGCGATGTTGATGATGTTGCGCTACAACGTTCATCATCTTCCTGTACTTCGTAATAAGCAGCCTATTGG
CGTACTTGAAGTCTCTGATATCGTGCGTTATGAATCTCAAAATAGCCTGTTATTTGTGAGCAGTATCTTCCAACAACAAA
CCATCGAAGATCTCGTTATTCTTTCTGCTCAACTTAAAGATTGTTTTGTACGAATGGTAAACGAAGATGCCAACTCACAC
ATGGTGGGTAGCGCGATGTCTGAAATTGGTCGCAGCTTCAAACAACGTTTATTAGAGCTCGCTGAAGAAGAATTAGGTCA
CCCACCTGTGCCTTATTGTTTCTTAGCATTAGGATCAATGGCTCGCGATGAACAACTGATTGTAACTGACCAAGATAACG
CAATTATTTTAGACAATGACTACAATGAAGCCGAACACGGTGACTATTTTAAAGCCTTATCGGCTTTTGTTTGTGATGGT
TTAGCGGCATGTGGTTATACCTATTGTACTGGCGATATCATGGCAACCAATCCTGAATGGCGTAAAACTCAATCGGAATG
GGAAGAATGCTTTGCTGACTGGATTGATAACCCAGATCCTCAGGCATTATTAAACAGCTCTATCTTCTTCGATTTAAATG
GCGTTTATGGCCGTACTAAATGGGCTGAGCAGTTAAATGGCTTTATTGTTCGTCGTGCGAAAAAGAACAATCGTTTCCTT
GCTTGTCTTGCTCGAAACGGCTTACGCCGAACGCCACCACTGGGGTTCTTTAAAGACTTCGTGATGGAGAAAGATGGTCG
CCATAATAACTCGATCAACTTAAAACGTCGCGGAACCGCCCCCCTTGCTGATCTTATTCGTGTTCATGCTTTGGCTATTG
GCTCTCAAGCCCAAAACTCCTTTGAACGTTTAGATGACATTATTGAAGCCGGTATTCTGCCAAAATCAAAAGGCGGAGAT
TTACATCATGCGATGGAATTGATTTCTTTGGTTCGTTTACGTCACCAAGCGTTAGATGTCGAAGCAAACATTGAACCGGA
TAATAATATTGAGCCTGAAAACATGTCTGATTTTGAACGCCGAAATTTAAAGGATGCGTTCCAAGTACTCAGCAATGCAC
AAAACTTCCTTAAATTTCGCTATAGCGCCAGCAAATTCTAG

Upstream 100 bases:

>100_bases
AATGCTTTCATATCGCGTAATTTAATAGAATAAAATGGCTATCCATAAGGCGATAAACTAAAATTATAGCCTATCCTCCT
TTATTTATGTCGAGTGGCAC

Downstream 100 bases:

>100_bases
GAGTGAATAATGATTTCTAACACTCATCAAGAAATTTTAAACTGGACCGCTTTCTTTACTCATAAATACGAAGCAAGTAA
AGATCAGCGCCTTAAAAATT

Product: cyclic nucleotide binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVIGFGDEIKDLYMVRSGIIEVYRRNGELYNRLDQGSI
FGQMGLLMNNKVRFPAKALKDSLLYCIPESVFDDYCERYDEFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTRE
AVMITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEVMSTELISLDHNA
YVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQNSLLFVSSIFQQQTIEDLVILSAQLKDCFVRMVNEDANSH
MVGSAMSEIGRSFKQRLLELAEEELGHPPVPYCFLALGSMARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCDG
LAACGYTYCTGDIMATNPEWRKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGRTKWAEQLNGFIVRRAKKNNRFL
ACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAIGSQAQNSFERLDDIIEAGILPKSKGGD
LHHAMELISLVRLRHQALDVEANIEPDNNIEPENMSDFERRNLKDAFQVLSNAQNFLKFRYSASKF

Sequences:

>Translated_626_residues
MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVIGFGDEIKDLYMVRSGIIEVYRRNGELYNRLDQGSI
FGQMGLLMNNKVRFPAKALKDSLLYCIPESVFDDYCERYDEFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTRE
AVMITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEVMSTELISLDHNA
YVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQNSLLFVSSIFQQQTIEDLVILSAQLKDCFVRMVNEDANSH
MVGSAMSEIGRSFKQRLLELAEEELGHPPVPYCFLALGSMARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCDG
LAACGYTYCTGDIMATNPEWRKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGRTKWAEQLNGFIVRRAKKNNRFL
ACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAIGSQAQNSFERLDDIIEAGILPKSKGGD
LHHAMELISLVRLRHQALDVEANIEPDNNIEPENMSDFERRNLKDAFQVLSNAQNFLKFRYSASKF
>Mature_626_residues
MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVIGFGDEIKDLYMVRSGIIEVYRRNGELYNRLDQGSI
FGQMGLLMNNKVRFPAKALKDSLLYCIPESVFDDYCERYDEFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTRE
AVMITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEVMSTELISLDHNA
YVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQNSLLFVSSIFQQQTIEDLVILSAQLKDCFVRMVNEDANSH
MVGSAMSEIGRSFKQRLLELAEEELGHPPVPYCFLALGSMARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCDG
LAACGYTYCTGDIMATNPEWRKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGRTKWAEQLNGFIVRRAKKNNRFL
ACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAIGSQAQNSFERLDDIIEAGILPKSKGGD
LHHAMELISLVRLRHQALDVEANIEPDNNIEPENMSDFERRNLKDAFQVLSNAQNFLKFRYSASKF

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 71146; Mature: 71146

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVIGFGDEIKDLYMVRSG
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECEEEEECCHHHHHHHHHHHH
IIEVYRRNGELYNRLDQGSIFGQMGLLMNNKVRFPAKALKDSLLYCIPESVFDDYCERYD
HHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
EFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTREAVMITKYETIQSAAKTMAEE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHC
NVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEVMSTELISLDHNA
CCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
YVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQNSLLFVSSIFQQQTIEDLVI
HHHHHHHHHHHHCCCCCCEECCCCCCCEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
LSAQLKDCFVRMVNEDANSHMVGSAMSEIGRSFKQRLLELAEEELGHPPVPYCFLALGSM
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCDGLAACGYTYCTGDIMATNPEW
CCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCEEECCCHH
RKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGRTKWAEQLNGFIVRRAKKNNRFL
HHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCEE
ACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAIGSQAQNS
EEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHH
FERLDDIIEAGILPKSKGGDLHHAMELISLVRLRHQALDVEANIEPDNNIEPENMSDFER
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHH
RNLKDAFQVLSNAQNFLKFRYSASKF
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVIGFGDEIKDLYMVRSG
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECEEEEECCHHHHHHHHHHHH
IIEVYRRNGELYNRLDQGSIFGQMGLLMNNKVRFPAKALKDSLLYCIPESVFDDYCERYD
HHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
EFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTREAVMITKYETIQSAAKTMAEE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHC
NVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEVMSTELISLDHNA
CCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
YVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQNSLLFVSSIFQQQTIEDLVI
HHHHHHHHHHHHCCCCCCEECCCCCCCEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH
LSAQLKDCFVRMVNEDANSHMVGSAMSEIGRSFKQRLLELAEEELGHPPVPYCFLALGSM
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCDGLAACGYTYCTGDIMATNPEW
CCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCEEECCCHH
RKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGRTKWAEQLNGFIVRRAKKNNRFL
HHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCEE
ACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAIGSQAQNS
EEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHH
FERLDDIIEAGILPKSKGGDLHHAMELISLVRLRHQALDVEANIEPDNNIEPENMSDFER
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHH
RNLKDAFQVLSNAQNFLKFRYSASKF
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]