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The map label for this gene is uidR [C]

Identifier: 209693715

GI number: 209693715

Start: 121963

End: 122562

Strand: Reverse

Name: uidR [C]

Synonym: VSAL_I0091

Alternate gene names: 209693715

Gene position: 122562-121963 (Counterclockwise)

Preceding gene: 209693717

Following gene: 209693714

Centisome position: 3.69

GC content: 37.0

Gene sequence:

>600_bases
ATGAACGTTCATTCATTTCATAAGGATTCATTTATGAAGGAGAAACGTAGACTCATTCTTGAGTCAGCAGAACAATTACT
TGCAACTGACGGGTTCCGTGGTCTATCAATGCAAAAAGTGGCAAATCAAGCTGGCGTTGCTGCTGGTACCATTTATCGCT
ATTTCGATGATAAAGAAGCCCTGATCCAAGAGATTAAGTTGAATATTCTTCAACGTGTCGCTTGTGCTATTCAAGAAAAT
GTATGCAATACCGACCCTTTAAAAGTTCGCTTTCGTACAATGTGGTTAAACATTTGGTATTTTGCTATTTCAGAAAAAAA
CACTTTTTTAAATCGCAATCAATATGAATCATTACCTACAACAGATTTAGTAAAATTTAGGGAACTAGAAAAAGAAATGT
TTGCCCAAGTAAATCAACTCTTTGTCGATGGACTTGAGCAAGGCGTTTTTAAACCTTTCAATGTGGAAATACTTACAGGC
CTTAGCTTAGAGACAAGTGTTTGCTTAGCTCGCAGATATGCTCAAGGTACTTTTACACTAACAGACGATGATCTCGACTC
GGCAATTGAAGCCAGTTGGGATGCAATTATTAAACACTAA

Upstream 100 bases:

>100_bases
TGTATGAATACCATGTAAACCATAGAAGAAAACTCTCGACCTTTACGTTTCTTGACACAAAAACGGATTACTTTATGGAC
ATTCTCACTTAAAATAATAA

Downstream 100 bases:

>100_bases
TTTGGAGTTCTAATTAGAATGAAAAAGTGGACTTTCTTTATGTTGCTTCTTGCACTACTTATTTTTGGTAGTGTTATTGG
CTTTAACATGTTTAAACAGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAGVAAGTIYRYFDDKEALIQEIKLNILQRVACAIQEN
VCNTDPLKVRFRTMWLNIWYFAISEKNTFLNRNQYESLPTTDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTG
LSLETSVCLARRYAQGTFTLTDDDLDSAIEASWDAIIKH

Sequences:

>Translated_199_residues
MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAGVAAGTIYRYFDDKEALIQEIKLNILQRVACAIQEN
VCNTDPLKVRFRTMWLNIWYFAISEKNTFLNRNQYESLPTTDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTG
LSLETSVCLARRYAQGTFTLTDDDLDSAIEASWDAIIKH
>Mature_199_residues
MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAGVAAGTIYRYFDDKEALIQEIKLNILQRVACAIQEN
VCNTDPLKVRFRTMWLNIWYFAISEKNTFLNRNQYESLPTTDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTG
LSLETSVCLARRYAQGTFTLTDDDLDSAIEASWDAIIKH

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22927; Mature: 22927

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAGVAAGTIYRYFDDKEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHH
LIQEIKLNILQRVACAIQENVCNTDPLKVRFRTMWLNIWYFAISEKNTFLNRNQYESLPT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHEEEEEEEEEECCCCCCCCCCCCCCCH
TDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTGLSLETSVCLARRYAQGTFTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEE
TDDDLDSAIEASWDAIIKH
CCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAGVAAGTIYRYFDDKEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHH
LIQEIKLNILQRVACAIQENVCNTDPLKVRFRTMWLNIWYFAISEKNTFLNRNQYESLPT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHEEEEEEEEEECCCCCCCCCCCCCCCH
TDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTGLSLETSVCLARRYAQGTFTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEE
TDDDLDSAIEASWDAIIKH
CCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]