| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is purE [H]
Identifier: 209693705
GI number: 209693705
Start: 83673
End: 84209
Strand: Reverse
Name: purE [H]
Synonym: VSAL_I0081
Alternate gene names: 209693705
Gene position: 84209-83673 (Counterclockwise)
Preceding gene: 209693709
Following gene: 209693704
Centisome position: 2.53
GC content: 43.2
Gene sequence:
>537_bases ATGCTGCCAACTTTTTATATATTGCCATTATCTTTATCCAAGGAGTTCACAATGAAAGTCGGTATTATCATGGGTTCGAA ATCAGATTGGCCAACAATGAAACTAGCCGCTGAAATGCTTGAGCGTTTTAATGTTCCTTACGAAACCAAAGTGGTCTCTG CTCATAGAACTCCACAATTACTTGCTGATTATGCAACTCAAGCAAAAGATCGCGGTATCAAAGTTATTATTGCAGGTGCT GGTGGTGCCGCTCACCTCCCAGGCATGGCAGCTGCATTTACGAGTATTCCTGTTTTAGGCGTCCCTGTTCAATCAAAAGT ATTAAAAGGGATAGACTCTCTACTTTCTATCGTTCAAATGCCAAAGGGGATCGCTGTAGGTACACTCGCGATAGGTGAGG CTGGCGCTGCAAATGCAGGTATCCTCGCAGCTCAAATCATTGGTACGTCAAATGAAGCAGTAATGGCAGCAGTAGAAGCC TTCCGTAAAGAACAAACAGATACTGTCTTAGCAAATCCAGATCCATCAGAGGATTAA
Upstream 100 bases:
>100_bases AAATCAAACAACCGCTTTCCATTTTTCAATTGTGAATAATCGTTAATAACTTGTACTTTTCCTAACGCAAACGTTTTCCT TCCTATTAAATAACCGTATA
Downstream 100 bases:
>100_bases TGATGAAAGTTCTTGTACTCGGTTCTGGTCAACTCGCTCGCATGATGTCTTTAGCGAGTGCTCCACTAAATATCGACATT ATCGCTTATGATGTGAACAA
Product: phosphoribosylaminoimidazole carboxylase catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGA GGAAHLPGMAAAFTSIPVLGVPVQSKVLKGIDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEA FRKEQTDTVLANPDPSED
Sequences:
>Translated_178_residues MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGA GGAAHLPGMAAAFTSIPVLGVPVQSKVLKGIDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEA FRKEQTDTVLANPDPSED >Mature_178_residues MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGA GGAAHLPGMAAAFTSIPVLGVPVQSKVLKGIDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEA FRKEQTDTVLANPDPSED
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=163, Percent_Identity=61.9631901840491, Blast_Score=171, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324702, Length=151, Percent_Identity=52.9801324503311, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 18606; Mature: 18606
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNVPYETKVVSAHRTPQL CCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEECCCCHHH LADYATQAKDRGIKVIIAGAGGAAHLPGMAAAFTSIPVLGVPVQSKVLKGIDSLLSIVQM HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHC PKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEAFRKEQTDTVLANPDPSED CCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNVPYETKVVSAHRTPQL CCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEECCCCHHH LADYATQAKDRGIKVIIAGAGGAAHLPGMAAAFTSIPVLGVPVQSKVLKGIDSLLSIVQM HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHC PKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEAFRKEQTDTVLANPDPSED CCCCEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA