| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is chrG [H]
Identifier: 308535354
GI number: 308535354
Start: 3654080
End: 3654595
Strand: Direct
Name: chrG [H]
Synonym: NA
Alternate gene names: 308535354
Gene position: 3654080-3654595 (Clockwise)
Preceding gene: 197119537
Following gene: 197119543
Centisome position: 79.18
GC content: 56.4
Gene sequence:
>516_bases GTGCGGAATAATCAGCAGGTAACACGCTTGATCCTATCTGGAGCGGAAACGCCGGAGATGCACTCCGGCCAGCGAGGATT CAGCCTGATCGAACTACTCACAGTCGTAGCTATCATCGGCATACTGGCGGCTATAGCTCTACCTGCGTTCTCCGACTATG TCTACAAGGCGCGCGTCGCCCGCTGCAAAGCAGAGATCGTGACGCTGCAAACCTCGATCACGGCCTATAAAATCAGCAAC AACCACCAGCCGGATACACTGGCAGAGGCAGGCTACGAGAACCTTCTGGACCCTTGGGGGCATCCTTATCGATACCTGAA CATCGCAGACGGCTCGGTAAAAGGTAAAGGGAGTTTCCGAAAGGACCGCTTCCTCAATCCCCTCAACTCGGATTTCGACC TCTACAGCATGGGTGCGGACGGCTTGAGCCGCACCCCGCTAAGCGCCGCGGAAAGCCATGACGACGTCATTCGTGCCAGC AATGGCGGGTTTATCGGCCTGGCATCGGATTTCTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: type II secretion system pseudopilin ChrG
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
NA
Sequences:
>Translated_171_residues MRNNQQVTRLILSGAETPEMHSGQRGFSLIELLTVVAIIGILAAIALPAFSDYVYKARVARCKAEIVTLQTSITAYKISN NHQPDTLAEAGYENLLDPWGHPYRYLNIADGSVKGKGSFRKDRFLNPLNSDFDLYSMGADGLSRTPLSAAESHDDVIRAS NGGFIGLASDF >Mature_171_residues MRNNQQVTRLILSGAETPEMHSGQRGFSLIELLTVVAIIGILAAIALPAFSDYVYKARVARCKAEIVTLQTSITAYKISN NHQPDTLAEAGYENLLDPWGHPYRYLNIADGSVKGKGSFRKDRFLNPLNSDFDLYSMGADGLSRTPLSAAESHDDVIRAS NGGFIGLASDF
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 18651; Mature: 18651
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNNQQVTRLILSGAETPEMHSGQRGFSLIELLTVVAIIGILAAIALPAFSDYVYKARVA CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCKAEIVTLQTSITAYKISNNHQPDTLAEAGYENLLDPWGHPYRYLNIADGSVKGKGSFR HHHHHHEEEEECEEEEEECCCCCCHHHHHHCHHHHHCCCCCCEEEEEECCCCCCCCCCCC KDRFLNPLNSDFDLYSMGADGLSRTPLSAAESHDDVIRASNGGFIGLASDF HHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCC >Mature Secondary Structure MRNNQQVTRLILSGAETPEMHSGQRGFSLIELLTVVAIIGILAAIALPAFSDYVYKARVA CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCKAEIVTLQTSITAYKISNNHQPDTLAEAGYENLLDPWGHPYRYLNIADGSVKGKGSFR HHHHHHEEEEECEEEEEECCCCCCHHHHHHCHHHHHCCCCCCEEEEEECCCCCCCCCCCC KDRFLNPLNSDFDLYSMGADGLSRTPLSAAESHDDVIRASNGGFIGLASDF HHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]