Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 308535187
Identifier: 308535187
GI number: 308535187
Start: 897331
End: 897864
Strand: Direct
Name: 308535187
Synonym: NA
Alternate gene names: NA
Gene position: 897331-897864 (Clockwise)
Preceding gene: 197117156
Following gene: 197117158
Centisome position: 19.44
GC content: 60.86
Gene sequence:
>534_bases ATGACTGAAACGAAAATGGGAGAAGCCAATATGTATCTGGAGATGAAGGTGTTCGGCTTCGCGCTAGATGCCATCGCGCA GATGCCGGTGATCATATTGAAGGATACCGAGGAAAAGCACGCGGTGCCGGTCTGGATCAACGCACAGGATTCGGTCGCCT TCGCTGCCCAGTTCGTGGGGCGCGAAGCGGCTGCCAGGACCCGCCGCAAGGACGTCTTTACCGCGCTCGTCGAACAGATG GAGATGACGCTGTCCCGCATCGTCATCGAAAGCCTTAAAGACGGCGCCTTCACCTCCTCCGTGCGGCTGTTGCCCCGGGA AGGTGAGGAGATCCGGCTGGAAGTGCACGTGACCGAGGCGATGCTCCTCTCTCTCAGGTACCAGCAGCCCGTGCTGGTGG ACCCCGACGTGCTGGCCCAGGTCTCCACCCTCGACCTCAAGGAGGACGGCCTGGCCGGCGAGAACAACGCCCGTCGTTTC GTCGACTTCCTGGACCACATGGATCCCGCTTCCATGGGGAAGTACCCCATGTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
NA
Sequences:
>Translated_177_residues MTETKMGEANMYLEMKVFGFALDAIAQMPVIILKDTEEKHAVPVWINAQDSVAFAAQFVGREAAARTRRKDVFTALVEQM EMTLSRIVIESLKDGAFTSSVRLLPREGEEIRLEVHVTEAMLLSLRYQQPVLVDPDVLAQVSTLDLKEDGLAGENNARRF VDFLDHMDPASMGKYPM >Mature_176_residues TETKMGEANMYLEMKVFGFALDAIAQMPVIILKDTEEKHAVPVWINAQDSVAFAAQFVGREAAARTRRKDVFTALVEQME MTLSRIVIESLKDGAFTSSVRLLPREGEEIRLEVHVTEAMLLSLRYQQPVLVDPDVLAQVSTLDLKEDGLAGENNARRFV DFLDHMDPASMGKYPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19877; Mature: 19746
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETKMGEANMYLEMKVFGFALDAIAQMPVIILKDTEEKHAVPVWINAQDSVAFAAQFVG CCCCCCCCCCEEEEEHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHH REAAARTRRKDVFTALVEQMEMTLSRIVIESLKDGAFTSSVRLLPREGEEIRLEVHVTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEHHH MLLSLRYQQPVLVDPDVLAQVSTLDLKEDGLAGENNARRFVDFLDHMDPASMGKYPM HHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TETKMGEANMYLEMKVFGFALDAIAQMPVIILKDTEEKHAVPVWINAQDSVAFAAQFVG CCCCCCCCCEEEEEHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHH REAAARTRRKDVFTALVEQMEMTLSRIVIESLKDGAFTSSVRLLPREGEEIRLEVHVTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEHHH MLLSLRYQQPVLVDPDVLAQVSTLDLKEDGLAGENNARRFVDFLDHMDPASMGKYPM HHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA