| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535168
Identifier: 308535168
GI number: 308535168
Start: 615899
End: 616552
Strand: Direct
Name: 308535168
Synonym: NA
Alternate gene names: NA
Gene position: 615899-616552 (Clockwise)
Preceding gene: 197116904
Following gene: 197116906
Centisome position: 13.35
GC content: 50.92
Gene sequence:
>654_bases ATGGAGAAAAATGATCAAACAATAGGAACCTTGAGTGAGATCGTCCGCGCGAGGAGAACGATACGCAGCTTTTCTAATAA CGTTCCGCCTGTGGAGGAAATGGAAGAGATTCTTCGATCAGCGATATTCGCTCCATTTGGTCGTGCCACAGGGCTTCCTC CAAAGGAGATCCGCAAGATTTTCGTCTTTTCGCAGGGTACGGAACCTATGGAACAGGCAAGAGAACTGCTGCTCATGGAG ATAAGTCGTGTTGCTCGCAAGGTGAAGATCGCAATCACTCTCTTCCCCTTTCTCAAAAAGACAATGGGGCTATTTGCAGA ACGCATTTCAGTGCTTGAACGAAAGGGGATACCCGGTCTTTTGGAAGCCCCGTACTATGTCGTCATTGCGACCCGAAAGG GGTTTCCAGCCATGGAAAAGCAAACCATAGCACATGCGATGCAAAACATGTGGCTGTCGGCTACTGCGCAAGGCCTCGGA TTGCAGCCCATTTCTCAGACCAGCATCATGTCGAAGAACAAGGAGTTCATGCAGTTGCTGGGGTTGAAGGCGGGCGATTA TGAGTTGGACGGATGTGTCATCGGGGTGCAGAAGGCGCCTGCCGAACCCCGCGAGGAACGTCAGCTGGAAGATTTCGTTA CCTGGGTTAGGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
NA
Sequences:
>Translated_217_residues MEKNDQTIGTLSEIVRARRTIRSFSNNVPPVEEMEEILRSAIFAPFGRATGLPPKEIRKIFVFSQGTEPMEQARELLLME ISRVARKVKIAITLFPFLKKTMGLFAERISVLERKGIPGLLEAPYYVVIATRKGFPAMEKQTIAHAMQNMWLSATAQGLG LQPISQTSIMSKNKEFMQLLGLKAGDYELDGCVIGVQKAPAEPREERQLEDFVTWVR >Mature_217_residues MEKNDQTIGTLSEIVRARRTIRSFSNNVPPVEEMEEILRSAIFAPFGRATGLPPKEIRKIFVFSQGTEPMEQARELLLME ISRVARKVKIAITLFPFLKKTMGLFAERISVLERKGIPGLLEAPYYVVIATRKGFPAMEKQTIAHAMQNMWLSATAQGLG LQPISQTSIMSKNKEFMQLLGLKAGDYELDGCVIGVQKAPAEPREERQLEDFVTWVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24484; Mature: 24484
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNDQTIGTLSEIVRARRTIRSFSNNVPPVEEMEEILRSAIFAPFGRATGLPPKEIRKI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH FVFSQGTEPMEQARELLLMEISRVARKVKIAITLFPFLKKTMGLFAERISVLERKGIPGL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LEAPYYVVIATRKGFPAMEKQTIAHAMQNMWLSATAQGLGLQPISQTSIMSKNKEFMQLL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHH GLKAGDYELDGCVIGVQKAPAEPREERQLEDFVTWVR CCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEKNDQTIGTLSEIVRARRTIRSFSNNVPPVEEMEEILRSAIFAPFGRATGLPPKEIRKI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH FVFSQGTEPMEQARELLLMEISRVARKVKIAITLFPFLKKTMGLFAERISVLERKGIPGL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LEAPYYVVIATRKGFPAMEKQTIAHAMQNMWLSATAQGLGLQPISQTSIMSKNKEFMQLL CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHH GLKAGDYELDGCVIGVQKAPAEPREERQLEDFVTWVR CCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA