| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535164
Identifier: 308535164
GI number: 308535164
Start: 546012
End: 546911
Strand: Direct
Name: 308535164
Synonym: NA
Alternate gene names: NA
Gene position: 546012-546911 (Clockwise)
Preceding gene: 197116852
Following gene: 197116855
Centisome position: 11.83
GC content: 63.22
Gene sequence:
>900_bases GTGAGAATCACAGCTGCAGTAATAACAGTTCTTGCCCTTGCCGCAGTACCTTGTTTTGCCGCAAACGGTGGCGCAACTGC CGGACGCGCCGGCGGGACCGGTGCCGCTGCGACGATACGCCAAGTGCCTCCCGGACAGCAAATGAATCAGGAGATGATGC CGACACCCGCCCACCTGCTGATGCGGGCCTATCACAGAAACGTCGCCAACTTCGCCCAGACCCTTTACCAGGCGGCGGAC CAGGGCCCGGTTGTGCAGCCTTCGTTGGCACGCACCGCCGTCTCCGAGATGCGGCGCAGCGTCGACGAGATGGAAAAACA AAGGGCAACGGCGCTTGGCGCAATGCGGCTGCCGCCGGAGCGGCAGAAGATGATGGACGAGCATCTGGTGCAGGTGAAGA CGCACCTGCGGCAGCTGGAAGAGATGGTGCAAAAGGAGCGGATCGATTCCGGGCTGGTGAAGAAAGAGCTGCAATCGATC TTCGTGGAGTGCGACGGGGCGGGGTGCTGTGCCCGGCCAAGCCCAGTGGGTCGGGGCCGTCAGGGAAAAGGTCCCTACGG CGGGAGGCCGGGGTGCGACTGCCCCAAGGGGAACCCCGACCACGCCATGATGATGGACGACATGATGGAGAAGGTAAAAA GCCAGGACGCGGAGCTGGCCCAGTTGGTGCAGCGGATGCGGCAGGCTGACGGCCAGGCGAAACTGGACCTGGTGGCGGAG ACCGTGGCGACCATGGTGCAGCAGCGGGCCGAGCTGACCGCGGACATGCAAAAGATGCACGACATGATGCAGGGAGAGTA TCCCGGCTCGGACCAGATGCTGAACGACGACGAGGACCAGGACCAGGGTGGAGACGAAGAGTACGATTTTGAGGACGAGG AGGACGTCACCGCCGACTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
NA
Sequences:
>Translated_299_residues MRITAAVITVLALAAVPCFAANGGATAGRAGGTGAAATIRQVPPGQQMNQEMMPTPAHLLMRAYHRNVANFAQTLYQAAD QGPVVQPSLARTAVSEMRRSVDEMEKQRATALGAMRLPPERQKMMDEHLVQVKTHLRQLEEMVQKERIDSGLVKKELQSI FVECDGAGCCARPSPVGRGRQGKGPYGGRPGCDCPKGNPDHAMMMDDMMEKVKSQDAELAQLVQRMRQADGQAKLDLVAE TVATMVQQRAELTADMQKMHDMMQGEYPGSDQMLNDDEDQDQGGDEEYDFEDEEDVTAD >Mature_299_residues MRITAAVITVLALAAVPCFAANGGATAGRAGGTGAAATIRQVPPGQQMNQEMMPTPAHLLMRAYHRNVANFAQTLYQAAD QGPVVQPSLARTAVSEMRRSVDEMEKQRATALGAMRLPPERQKMMDEHLVQVKTHLRQLEEMVQKERIDSGLVKKELQSI FVECDGAGCCARPSPVGRGRQGKGPYGGRPGCDCPKGNPDHAMMMDDMMEKVKSQDAELAQLVQRMRQADGQAKLDLVAE TVATMVQQRAELTADMQKMHDMMQGEYPGSDQMLNDDEDQDQGGDEEYDFEDEEDVTAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32740; Mature: 32740
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITAAVITVLALAAVPCFAANGGATAGRAGGTGAAATIRQVPPGQQMNQEMMPTPAHLL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCHHCCCCHHHHH MRAYHRNVANFAQTLYQAADQGPVVQPSLARTAVSEMRRSVDEMEKQRATALGAMRLPPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RQKMMDEHLVQVKTHLRQLEEMVQKERIDSGLVKKELQSIFVECDGAGCCARPSPVGRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QGKGPYGGRPGCDCPKGNPDHAMMMDDMMEKVKSQDAELAQLVQRMRQADGQAKLDLVAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH TVATMVQQRAELTADMQKMHDMMQGEYPGSDQMLNDDEDQDQGGDEEYDFEDEEDVTAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRITAAVITVLALAAVPCFAANGGATAGRAGGTGAAATIRQVPPGQQMNQEMMPTPAHLL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCHHCCCCHHHHH MRAYHRNVANFAQTLYQAADQGPVVQPSLARTAVSEMRRSVDEMEKQRATALGAMRLPPE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RQKMMDEHLVQVKTHLRQLEEMVQKERIDSGLVKKELQSIFVECDGAGCCARPSPVGRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QGKGPYGGRPGCDCPKGNPDHAMMMDDMMEKVKSQDAELAQLVQRMRQADGQAKLDLVAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH TVATMVQQRAELTADMQKMHDMMQGEYPGSDQMLNDDEDQDQGGDEEYDFEDEEDVTAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA