| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119946
Identifier: 197119946
GI number: 197119946
Start: 4102595
End: 4103113
Strand: Direct
Name: 197119946
Synonym: Gbem_3585
Alternate gene names: NA
Gene position: 4102595-4103113 (Clockwise)
Preceding gene: 197119945
Following gene: 197119947
Centisome position: 88.89
GC content: 55.3
Gene sequence:
>519_bases ATGAGAGTAGTGAGAGAAGTAATTATCACTTGCCTGGTCATTGCCGCAATTACCGGGTTTGCTCTGGCTGCGCCCCCTGA TCTCGATAAATACCGGACCTGCAACTACTGCGGCATGGACAGGTCGAAATATGGCCACAGCAGAATGCTCATAGAATACG ACGACGGCACCTCCGTGGCAGCCTGCAGCCTTCACTGTGCCGCTGTTGATCTTGCAGTCAACATTGACCGGACAGCATCA CACATCTACGTAGGCGATTACGGCAGCAGGAAACTCATCGATGCGGAAACCGCCTCCTGGGTCATCGGAGGCAGCCGGCC GGGAGTGATGTCCGCTAATGCCAAGTGGGCTTTCGAGACAAAAGAAGGGGCTGCCGGATTTATAAAGGAGCATGGCGGGA CGCTTAGCACATTCGATGACTCCGTCAGCGCTGCTTATCTCGACATGTACAAAGACACGAAGGCGATCAGGGAACGGCAC AAAGCAAAGCATCGGGGCAGCAGCGGGGGGCCCAGATGA
Upstream 100 bases:
>100_bases CTGGATAGAAACGGCACCCTAAGACAGAAGGTCCTTGGACAGATCTCGGCAGCCAAGCTAGAGCAGCTAATCCAGCAAGT CAATTAGCATGAGGACGCAC
Downstream 100 bases:
>100_bases TCCGCCGCATCCTCAACCATTTCTCAGTGTATATCACTCCTTTTTTACTCGCTTCGCTGGGGATGGCTGCCAATATAAAG CCGGATAAGGTTGGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRVVREVIITCLVIAAITGFALAAPPDLDKYRTCNYCGMDRSKYGHSRMLIEYDDGTSVAACSLHCAAVDLAVNIDRTAS HIYVGDYGSRKLIDAETASWVIGGSRPGVMSANAKWAFETKEGAAGFIKEHGGTLSTFDDSVSAAYLDMYKDTKAIRERH KAKHRGSSGGPR
Sequences:
>Translated_172_residues MRVVREVIITCLVIAAITGFALAAPPDLDKYRTCNYCGMDRSKYGHSRMLIEYDDGTSVAACSLHCAAVDLAVNIDRTAS HIYVGDYGSRKLIDAETASWVIGGSRPGVMSANAKWAFETKEGAAGFIKEHGGTLSTFDDSVSAAYLDMYKDTKAIRERH KAKHRGSSGGPR >Mature_172_residues MRVVREVIITCLVIAAITGFALAAPPDLDKYRTCNYCGMDRSKYGHSRMLIEYDDGTSVAACSLHCAAVDLAVNIDRTAS HIYVGDYGSRKLIDAETASWVIGGSRPGVMSANAKWAFETKEGAAGFIKEHGGTLSTFDDSVSAAYLDMYKDTKAIRERH KAKHRGSSGGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18626; Mature: 18626
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVREVIITCLVIAAITGFALAAPPDLDKYRTCNYCGMDRSKYGHSRMLIEYDDGTSVA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCEE ACSLHCAAVDLAVNIDRTASHIYVGDYGSRKLIDAETASWVIGGSRPGVMSANAKWAFET HEEEEEEEEEEEEECCCCCCEEEECCCCCCEEEECCCCEEEEECCCCCEEECCCEEEEEC KEGAAGFIKEHGGTLSTFDDSVSAAYLDMYKDTKAIRERHKAKHRGSSGGPR CCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRVVREVIITCLVIAAITGFALAAPPDLDKYRTCNYCGMDRSKYGHSRMLIEYDDGTSVA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCEE ACSLHCAAVDLAVNIDRTASHIYVGDYGSRKLIDAETASWVIGGSRPGVMSANAKWAFET HEEEEEEEEEEEEECCCCCCEEEECCCCCCEEEECCCCEEEEECCCCCEEECCCEEEEEC KEGAAGFIKEHGGTLSTFDDSVSAAYLDMYKDTKAIRERHKAKHRGSSGGPR CCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA