| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is resA [H]
Identifier: 197119945
GI number: 197119945
Start: 4102087
End: 4102581
Strand: Direct
Name: resA [H]
Synonym: Gbem_3584
Alternate gene names: 197119945
Gene position: 4102087-4102581 (Clockwise)
Preceding gene: 197119944
Following gene: 197119946
Centisome position: 88.88
GC content: 53.94
Gene sequence:
>495_bases ATGGCGCGACTGACCTGCTGCTTCTCCCTGCTCTTTGCCATCACTGCGGCGATCTTTTCTTCGGGGTGCGACAGGAAGAT GGTGAAGGTAGGCGAGCAAGCGCCGCCGGTCTCGGGAAGGGACATTCGCGGCAACCAGGTGTCGCCTGAGACCTTGAAAG GCAAGGTCGTTGTCCTTTACTTCTGGACTAATTCATGCTGCGGCGAAACTCTGAAAGAGGACCTGGAGCCGGTTTATCGC AGGAACAAGGACAGGGGACTGGCGGTCATCGCGGTAAACGAGTTCGACGAGGAAAAAGATTTAGTTTCTATAGCGGCAAC TAACCGGCTCTCAGTTCCGATAATGGTGGATGCCGGCTCTACATTGGCGAAAGACTTCACGGTCTTTGCCTTCCCTACAG CGTTCATACTGGATAGAAACGGCACCCTAAGACAGAAGGTCCTTGGACAGATCTCGGCAGCCAAGCTAGAGCAGCTAATC CAGCAAGTCAATTAG
Upstream 100 bases:
>100_bases GGCGCCGGCTGCTTTGATGCGTCAGTGACTGCGGGTACAATTGAACGCACTCTTAGGCTGATGGGCCAGCGGTAGCAAAA GGAATCAGGAGAATCACCAG
Downstream 100 bases:
>100_bases CATGAGGACGCACATGAGAGTAGTGAGAGAAGTAATTATCACTTGCCTGGTCATTGCCGCAATTACCGGGTTTGCTCTGG CTGCGCCCCCTGATCTCGAT
Product: protein disulfide reductase lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MARLTCCFSLLFAITAAIFSSGCDRKMVKVGEQAPPVSGRDIRGNQVSPETLKGKVVVLYFWTNSCCGETLKEDLEPVYR RNKDRGLAVIAVNEFDEEKDLVSIAATNRLSVPIMVDAGSTLAKDFTVFAFPTAFILDRNGTLRQKVLGQISAAKLEQLI QQVN
Sequences:
>Translated_164_residues MARLTCCFSLLFAITAAIFSSGCDRKMVKVGEQAPPVSGRDIRGNQVSPETLKGKVVVLYFWTNSCCGETLKEDLEPVYR RNKDRGLAVIAVNEFDEEKDLVSIAATNRLSVPIMVDAGSTLAKDFTVFAFPTAFILDRNGTLRQKVLGQISAAKLEQLI QQVN >Mature_163_residues ARLTCCFSLLFAITAAIFSSGCDRKMVKVGEQAPPVSGRDIRGNQVSPETLKGKVVVLYFWTNSCCGETLKEDLEPVYRR NKDRGLAVIAVNEFDEEKDLVSIAATNRLSVPIMVDAGSTLAKDFTVFAFPTAFILDRNGTLRQKVLGQISAAKLEQLIQ QVN
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18018; Mature: 17887
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLTCCFSLLFAITAAIFSSGCDRKMVKVGEQAPPVSGRDIRGNQVSPETLKGKVVVLY CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE FWTNSCCGETLKEDLEPVYRRNKDRGLAVIAVNEFDEEKDLVSIAATNRLSVPIMVDAGS EECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHEEEEEECCCCCEEEEEECCC TLAKDFTVFAFPTAFILDRNGTLRQKVLGQISAAKLEQLIQQVN HHHHCEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLTCCFSLLFAITAAIFSSGCDRKMVKVGEQAPPVSGRDIRGNQVSPETLKGKVVVLY CHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE FWTNSCCGETLKEDLEPVYRRNKDRGLAVIAVNEFDEEKDLVSIAATNRLSVPIMVDAGS EECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHEEEEEECCCCCEEEEEECCC TLAKDFTVFAFPTAFILDRNGTLRQKVLGQISAAKLEQLIQQVN HHHHCEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA