Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197119912
Identifier: 197119912
GI number: 197119912
Start: 4065439
End: 4065939
Strand: Direct
Name: 197119912
Synonym: Gbem_3551
Alternate gene names: NA
Gene position: 4065439-4065939 (Clockwise)
Preceding gene: 308535378
Following gene: 197119913
Centisome position: 88.09
GC content: 60.88
Gene sequence:
>501_bases ATGCGCGCTCTCGCCCTGCTGTCACTGATACTGGTACTCTCGTCTCCGTTATCCTTATCCGCCAAAGAGAGGGGTAAGCG CACTGCCACCAGCGCAGCCCAAAGCGGCGTCGCTTCCAGCCAGGAAGTCCTGGGGGATTTCGAGAAGATCCTCGATCTTT GGCGTGACGGCAGCTACGACGAGCTGTACAGGCGAACCACCGGGGGACGGGAAAGCAAGGAAACCTTCGCCAGGAAGCTC TCCGCCGCCCCGCGCCGCCCCGCGTGCTGCTGGGAGAAAATGCAGGACGTTGAAGTCTCTTCGAAAGGAGAGGGAAAAGC CGTGGTCCGCGCGCGCCTCGGCTTCGAGGGGAGCGTCCCCGGCACCCAGTTCGTCACCAAGTCGATCAAACTGCAGAAAG AAGGGAGTGTCTGGGCCATCAGTCAGTCCGACCTCCTTTCCCTCGCCGACTACTCCAAAAAGCGCAAGCTGTATCGCTAC CTCCCGGTCCAGCAGAAATGA
Upstream 100 bases:
>100_bases GTTAGAGTTCAGCAGCCGATCTGTGGCTTCAGCAGCCGATCTGTGGCGCGAACCGCGGGTTGCGATATGATTAGCCGGTC TTTTCCAGGAGGATCTTCCT
Downstream 100 bases:
>100_bases CAGGCGCCCCCTCCCGCAGCTAGCCCGCCCCCCGCCCCCGCTGCCATCTCCATCTCGATTCAACACTTTATCTTTATCTT TATCTCAATCTGCCTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY LPVQQK
Sequences:
>Translated_166_residues MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY LPVQQK >Mature_166_residues MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYDELYRRTTGGRESKETFARKL SAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVPGTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRY LPVQQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18389; Mature: 18389
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYD CHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH ELYRRTTGGRESKETFARKLSAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVP HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC GTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRYLPVQQK CHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRALALLSLILVLSSPLSLSAKERGKRTATSAAQSGVASSQEVLGDFEKILDLWRDGSYD CHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH ELYRRTTGGRESKETFARKLSAAPRRPACCWEKMQDVEVSSKGEGKAVVRARLGFEGSVP HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC GTQFVTKSIKLQKEGSVWAISQSDLLSLADYSKKRKLYRYLPVQQK CHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA