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The map label for this gene is ybgF [H]

Identifier: 197119877

GI number: 197119877

Start: 4026517

End: 4027368

Strand: Direct

Name: ybgF [H]

Synonym: Gbem_3515

Alternate gene names: 197119877

Gene position: 4026517-4027368 (Clockwise)

Preceding gene: 197119876

Following gene: 197119878

Centisome position: 87.25

GC content: 58.45

Gene sequence:

>852_bases
ATGCAGGCAATGAGAGTGGCACTGGGGTCACTGGTACTGCTCGCCTTTTTCGGTTGCGCCAGCCAGAGTGAACTCGAATC
GGTGCGCCGCGATTCGGACGAGATGAAGAACCGCCTCTTCACCATGGAGAAGGGGTTGAACGAGACGCGCGCCGAAGTAA
GGGATGGGGTGGAGAAATCGCTGGCTGGTTACCGCCAGAGCCTCGAATCTCTGCAGTCCGACATGTCCGGGTTCCAGAAG
GAGATGACGGGAATCAGGAAAGGGGGCGCCGACCTTCAGGCGACCCTGGAGAGCGCCCGGGTCGACATGCAGCTTTTGAC
CGGGAAGGTGGACGACGTGCGCATCCTGGCCCAGAAGCCGGCTGACGACATCGCGCTCTTGAAAGAAGACCTGACCAAGC
GTCTTGCCGCACTCGAAGAGCGGATGGCCAAGATGGAAAAGGGGGTCGAGGAGCAGGCGAAAAAGGAGGCCGAACTGCAG
CAGGCGCCCGAGTACCTCTACCAGAAGGGGTACGAAGCGATGAAGGAGGGGAACCTCCCCAAGGCGCGGGAACTCTTTTC
AAGCTTCCTGGAGCATCACCCCAAGCACAACCTGGCAGCGAACGCCCAGTACTGGATCGGCGAGAGCTACTACTCCGAGA
AGAAGTTCGAGAACGCGGTGCTCGAGTTCGAGAACGTGATCAAGAACTACCCCAACAAAGACAAGGCTCCCGCCGCCATG
CTGAAGCAGGGGATGGCCTTCAGGGAATTGGGCGACAGCAAGAGCGCCAACTACATCCTGAAGAAACTGGTGGAAGAGCA
TCCGAAGTCGGAAGAGGCTAAGATCGCCAGAGAGAAATACAAGATCAGATAG

Upstream 100 bases:

>100_bases
GGATGAATTCGTCATCGTCAAGTAACTCAAGCAGTTCCTGCCGAAAAGGAGCCTCAGGGCTCCTTTTTTTATAGAGCAGC
AGGATCACAGGAGGTTTGTC

Downstream 100 bases:

>100_bases
TCCGCAGGCGTCCGCGGTATTACGGCCCCCCTGCCGCAAACAGGGGGGCCGTGCCGTTTCTCACCGGGTCATCCCCATAA
AACATTCACGACAGACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQAMRVALGSLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLNETRAEVRDGVEKSLAGYRQSLESLQSDMSGFQK
EMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKPADDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQ
QAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAM
LKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIAREKYKIR

Sequences:

>Translated_283_residues
MQAMRVALGSLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLNETRAEVRDGVEKSLAGYRQSLESLQSDMSGFQK
EMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKPADDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQ
QAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAM
LKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIAREKYKIR
>Mature_283_residues
MQAMRVALGSLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLNETRAEVRDGVEKSLAGYRQSLESLQSDMSGFQK
EMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKPADDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQ
QAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAM
LKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIAREKYKIR

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=94, Percent_Identity=31.9148936170213, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32125; Mature: 32125

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAMRVALGSLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLNETRAEVRDGVEKS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAGYRQSLESLQSDMSGFQKEMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
ADDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAM
HHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIAREKYKIR
HHHCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQAMRVALGSLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLNETRAEVRDGVEKS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAGYRQSLESLQSDMSGFQKEMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
ADDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAM
HHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIAREKYKIR
HHHCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]