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The map label for this gene is hpnH

Identifier: 197119727

GI number: 197119727

Start: 3866630

End: 3867628

Strand: Direct

Name: hpnH

Synonym: Gbem_3363

Alternate gene names: NA

Gene position: 3866630-3867628 (Clockwise)

Preceding gene: 197119726

Following gene: 197119730

Centisome position: 83.78

GC content: 57.26

Gene sequence:

>999_bases
ATGCGTTTTCCAATGCGATTGAACTATGATCTGACCAGGTACATCGTTTCCAACAAGCTGAACAAGATAGAGAAGTACCC
GCTGGTACTGATGCTTGAGCCTACGCACCTATGCAACCTCGCCTGCTCCGGGTGCGGCAGGATCAGGGAGTACGCCGACA
CCATTCAGGAGATGATGTCACTGAAGCAGTGCCTCGACTCGGTTGACGAATGCCCGGCGCCGGTAGTCACCATAACCGGC
GGCGAACCCTTTCTCTATCCGCACATCTTCCAGCTCATCGAAAAGGTACTGGAGCGCGGCAAGCACATCTACCTCTGCAC
CAATGCGCTGCTGCTAGAAAAGGCGCTGGACAGCATGAAGCCGCACCCGAACCTGGTCATCAACGTGCACATGGACGGCA
TGGAGGAGACCCACGACCGGATACTGGAACGCCCCGGCACCTTCAAGATCGCCATGTCCGCCATCCGCAAAGCCAAGCAA
TTGGGCTTCAGGCTCTGCACCAACACCACCATCTTCAAAGAGACCGACCTGATCGAGATAGAGATGCTCTTCTCGCACCT
GAAGGATATCGGGGTCGACGGCTTCTTGGTCGCGCCCGGATTCGGCTACGAGGCGGTGGGAGAAAAGCTTTTCCTGGAGC
GTCGGGAAATCCAGAAGAAGTTCGAGGAAGTCTTCGAGATGAGCAAGCGTTTCCGGTTCTTCTCCACGCCCATGTACCTT
CGTTTCCTGAAAGGGGCGAAAGAACTCGACTGCACCCCATGGGGGAACCCGACCAGGAACCCGCGCGGCTGGAAGGCCCC
CTGCTACCTGATCACCGACGAGCACTACGGGAGTTTTGCCGAGATGATGGAGAAGACGCAGTGGGAGAAGTACGGCGTCG
GCAAGGATCCGCGCTGCGCCCAGTGCATGATGCACTGCGGCTTCGAGCCGACCGTGGTGGGAGAGATCGGGAAGAGCTGG
AAGGATATCTGGGAGATGTTCTGCTGGAACTTGACCTAA

Upstream 100 bases:

>100_bases
TCACCAGATGCGGGACAGGCTGAGCGGAAGATTTTCTCCGGCTTGTCCCGCAACCTTGTTCGTCCGTAAAATCCAGAGCC
ATAAAGGAAGCCTACTTACC

Downstream 100 bases:

>100_bases
ACCTGAGCCCAGCTCAGGGTGGGGTTGCGCCAGAACGAGGCACAGAGCCTCAGGCGGGAGGATGTGACATTCCGCTCTGC
CTTTAGAAAAAGAAAAGGGG

Product: radical SAM protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Domain Protein; Radical SAM Family Protein; Radical SAM Family Fe-S Protein; Fe-S Oxidoreductase; Molybdenum Cofactor Biosynthesis Protein A; Heme D1 Biosynthesis Protein; Heme Biosynthesis Protein; Co PQQ Synthesis Protein; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Fe-S Oxidoreductases; Hopanoid Biosynthesis Associated Radical SAM Protein; Co PQQ Synthesis Protein E; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical Sam Domain Protein; PqqE-Like Protein; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Oxidoreductase

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRFPMRLNYDLTRYIVSNKLNKIEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMSLKQCLDSVDECPAPVVTITG
GEPFLYPHIFQLIEKVLERGKHIYLCTNALLLEKALDSMKPHPNLVINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQ
LGFRLCTNTTIFKETDLIEIEMLFSHLKDIGVDGFLVAPGFGYEAVGEKLFLERREIQKKFEEVFEMSKRFRFFSTPMYL
RFLKGAKELDCTPWGNPTRNPRGWKAPCYLITDEHYGSFAEMMEKTQWEKYGVGKDPRCAQCMMHCGFEPTVVGEIGKSW
KDIWEMFCWNLT

Sequences:

>Translated_332_residues
MRFPMRLNYDLTRYIVSNKLNKIEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMSLKQCLDSVDECPAPVVTITG
GEPFLYPHIFQLIEKVLERGKHIYLCTNALLLEKALDSMKPHPNLVINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQ
LGFRLCTNTTIFKETDLIEIEMLFSHLKDIGVDGFLVAPGFGYEAVGEKLFLERREIQKKFEEVFEMSKRFRFFSTPMYL
RFLKGAKELDCTPWGNPTRNPRGWKAPCYLITDEHYGSFAEMMEKTQWEKYGVGKDPRCAQCMMHCGFEPTVVGEIGKSW
KDIWEMFCWNLT
>Mature_332_residues
MRFPMRLNYDLTRYIVSNKLNKIEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMSLKQCLDSVDECPAPVVTITG
GEPFLYPHIFQLIEKVLERGKHIYLCTNALLLEKALDSMKPHPNLVINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQ
LGFRLCTNTTIFKETDLIEIEMLFSHLKDIGVDGFLVAPGFGYEAVGEKLFLERREIQKKFEEVFEMSKRFRFFSTPMYL
RFLKGAKELDCTPWGNPTRNPRGWKAPCYLITDEHYGSFAEMMEKTQWEKYGVGKDPRCAQCMMHCGFEPTVVGEIGKSW
KDIWEMFCWNLT

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38547; Mature: 38547

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPMRLNYDLTRYIVSNKLNKIEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS
CCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQCLDSVDECPAPVVTITGGEPFLYPHIFQLIEKVLERGKHIYLCTNALLLEKALDSMK
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC
PHPNLVINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFKETDLIEI
CCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
EMLFSHLKDIGVDGFLVAPGFGYEAVGEKLFLERREIQKKFEEVFEMSKRFRFFSTPMYL
HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RFLKGAKELDCTPWGNPTRNPRGWKAPCYLITDEHYGSFAEMMEKTQWEKYGVGKDPRCA
HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHH
QCMMHCGFEPTVVGEIGKSWKDIWEMFCWNLT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFPMRLNYDLTRYIVSNKLNKIEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS
CCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQCLDSVDECPAPVVTITGGEPFLYPHIFQLIEKVLERGKHIYLCTNALLLEKALDSMK
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC
PHPNLVINVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFKETDLIEI
CCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
EMLFSHLKDIGVDGFLVAPGFGYEAVGEKLFLERREIQKKFEEVFEMSKRFRFFSTPMYL
HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RFLKGAKELDCTPWGNPTRNPRGWKAPCYLITDEHYGSFAEMMEKTQWEKYGVGKDPRCA
HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHH
QCMMHCGFEPTVVGEIGKSWKDIWEMFCWNLT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA