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The map label for this gene is omcB

Identifier: 197119718

GI number: 197119718

Start: 3853851

End: 3855686

Strand: Direct

Name: omcB

Synonym: Gbem_3354

Alternate gene names: NA

Gene position: 3853851-3855686 (Clockwise)

Preceding gene: 197119701

Following gene: 197119719

Centisome position: 83.5

GC content: 65.09

Gene sequence:

>1836_bases
ATGCGGCTAAAAAGTCTCCTTTTCCTCTTCCTTGTTCCGGTGCTGGTCGCCGGTTGCGGCGGCGGCACCAGCGACAACGG
GGTCCCCATTTCCAAGCTGGCGGCCTCGCAGGGGTGCATGAACCTAAGCTGCCACGGCACCATGACCTCCCCGGGGACCG
GGGCCGTCATCGCCGACGAATGGCGTGCTTCCGCCCACAACTTGAAAAACGGGGCCGGATGCGCCGACTGCCACGAACCG
GACGCGGGACACCCCAACACCTGCAGCAAGTGCCACGGCGGCGGAGGCTTCGGCGTGACCAAGAACCCGGACCAGGCTGG
CAAGTGCGGCAAGTGCCACGGGCTCTCCCATCCGGGCGACGTCATGGTGGCGCGGGCGCCGCAACACTTCGGCAACATGA
CCGCGAGCCTTGCCAACAACAAGTACCGCGCTTCCTATGTAAGCTCCAACTACGTGGGGAACTGCCGTGCCTGCCACAAC
CCCCACGATCCCAGCTCCGCAATGAACGTGAACCGCGACTGGGCCGCTTCCGGCCATGCCGACGTCCTCGCCGGGGCGAG
GACCGGGTACGATTTCAAGACGCGCGGCAGCTACCAGCCCGCCAGCACCACCTTCCAGTACTACTGCGTCCGCTGCCACA
CCTCGACCGGCTACGTGAAGTTCGTGACCAGCGCCTTCCAGGACGTCCGTCCCTTCGCCGGGCCGGGGTACGAGGTGGTG
CAGAATTATCCGCGCACCGTCGCTGCGGGTGCCGCGCAGCCGGCGGACACCCCCTCCCCGGACAAGACCAAAGAGGTCAC
CGCTTGCAACGTCTGCCACGACAACGGCGCAGGCCGTGCCTACAGCTGGGCCAGGCGCGCGGTGCCGCCGGTGACGATCT
ACTACAACTTCTCCTCTTCGAACAGCTCGCCCACGGTGAAGCTGAACAACAAAGCGACCTCCTACCCCAACGTCGGCCCC
TCGAACATCTGCCTTCCCTGCCACACCGGTCGCGGCATAGGGGCCATGATCTACGACGCCGTCGCCGCAGGGATCGATTT
CAGCAACACCAATAGCCCCGGCGCGCATGACTTCGCCGCCGGCGCCGTCCTCTTCAGAAAAGGGGGGTACGAGTTCGCGG
GACGAGACTACGTGCCGACCTACTTCCTTCACGACAAAATCGGCGTCGCCAACGAACACGGCACCGGGAACGACGGCCCC
TGCGTCGCCTGCCACATGAACTCCGGCAACAGCCACTTCTTCATGCCGGTGGCTTTCGACGGCACCGGTAAAATCGCCGA
GATAACCAGCCGGACCTGCGCGCAGTGCCACGTCGGCCAATACGCGCTGAGCCCGGCCATCCTGCAGACCGAGAAAGAAG
GTTTCGCCGCGGCGATCGCCATGCTCAACGTGCTGAAGACCGACGCGACGCTGCCGGTCGACCCGCTGAACCCGACGCGC
TCGAAGGTGCGCCCCCTGGCGAACAAGAACTCGGATTACAACGCCGCCTTCCCCGGGGGAGGCGCCAACACAATGGGAGC
CTTCTTCAACTCGGGGCTGCTCCAAAACGATCCCGGCGCCTTCGCCCACAACCGGGTCTACACCAAGCGGCTCATTTATG
ATTCCATCGACTGGCTCAGCAACGGCGCCCTCGACGGCGACGTGGAAAGCGCCATCAACAACGCCACGCTCGCGGTAAAC
AGCAAGACCGGGAAGGTGTCGCTCAGCAACCCGATCCTGGGCGGGTTCTACATCCCCGAGCAGGTAGACGGCCCGGCCTA
CGCCGCCGCCTTCGCCAAGGTAAAGGCAGACGCAATTAAGTACCTCTTGGGCGCACCGGGCGGAGCGCGCCCCTAG

Upstream 100 bases:

>100_bases
GTAATTGCTTTCCTCTGGTGAGCTGATCTTCATTTTTTAACTACATTTTTACTTTGGGAAGTGCTATAAGGTAGCGTCGA
AATCTCCCGGAGGTCATGCT

Downstream 100 bases:

>100_bases
GAAGCCATGAAACTATTACTGCACATATGCTGCGGGCCGTGCGCCATCTACCCCGTGAAGGAGCTTAGGTCCAGCGGGGT
GGATGTCACCGGCTTTTTTT

Product: lipoprotein cytochrome c

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MRLKSLLFLFLVPVLVAGCGGGTSDNGVPISKLAASQGCMNLSCHGTMTSPGTGAVIADEWRASAHNLKNGAGCADCHEP
DAGHPNTCSKCHGGGGFGVTKNPDQAGKCGKCHGLSHPGDVMVARAPQHFGNMTASLANNKYRASYVSSNYVGNCRACHN
PHDPSSAMNVNRDWAASGHADVLAGARTGYDFKTRGSYQPASTTFQYYCVRCHTSTGYVKFVTSAFQDVRPFAGPGYEVV
QNYPRTVAAGAAQPADTPSPDKTKEVTACNVCHDNGAGRAYSWARRAVPPVTIYYNFSSSNSSPTVKLNNKATSYPNVGP
SNICLPCHTGRGIGAMIYDAVAAGIDFSNTNSPGAHDFAAGAVLFRKGGYEFAGRDYVPTYFLHDKIGVANEHGTGNDGP
CVACHMNSGNSHFFMPVAFDGTGKIAEITSRTCAQCHVGQYALSPAILQTEKEGFAAAIAMLNVLKTDATLPVDPLNPTR
SKVRPLANKNSDYNAAFPGGGANTMGAFFNSGLLQNDPGAFAHNRVYTKRLIYDSIDWLSNGALDGDVESAINNATLAVN
SKTGKVSLSNPILGGFYIPEQVDGPAYAAAFAKVKADAIKYLLGAPGGARP

Sequences:

>Translated_611_residues
MRLKSLLFLFLVPVLVAGCGGGTSDNGVPISKLAASQGCMNLSCHGTMTSPGTGAVIADEWRASAHNLKNGAGCADCHEP
DAGHPNTCSKCHGGGGFGVTKNPDQAGKCGKCHGLSHPGDVMVARAPQHFGNMTASLANNKYRASYVSSNYVGNCRACHN
PHDPSSAMNVNRDWAASGHADVLAGARTGYDFKTRGSYQPASTTFQYYCVRCHTSTGYVKFVTSAFQDVRPFAGPGYEVV
QNYPRTVAAGAAQPADTPSPDKTKEVTACNVCHDNGAGRAYSWARRAVPPVTIYYNFSSSNSSPTVKLNNKATSYPNVGP
SNICLPCHTGRGIGAMIYDAVAAGIDFSNTNSPGAHDFAAGAVLFRKGGYEFAGRDYVPTYFLHDKIGVANEHGTGNDGP
CVACHMNSGNSHFFMPVAFDGTGKIAEITSRTCAQCHVGQYALSPAILQTEKEGFAAAIAMLNVLKTDATLPVDPLNPTR
SKVRPLANKNSDYNAAFPGGGANTMGAFFNSGLLQNDPGAFAHNRVYTKRLIYDSIDWLSNGALDGDVESAINNATLAVN
SKTGKVSLSNPILGGFYIPEQVDGPAYAAAFAKVKADAIKYLLGAPGGARP
>Mature_611_residues
MRLKSLLFLFLVPVLVAGCGGGTSDNGVPISKLAASQGCMNLSCHGTMTSPGTGAVIADEWRASAHNLKNGAGCADCHEP
DAGHPNTCSKCHGGGGFGVTKNPDQAGKCGKCHGLSHPGDVMVARAPQHFGNMTASLANNKYRASYVSSNYVGNCRACHN
PHDPSSAMNVNRDWAASGHADVLAGARTGYDFKTRGSYQPASTTFQYYCVRCHTSTGYVKFVTSAFQDVRPFAGPGYEVV
QNYPRTVAAGAAQPADTPSPDKTKEVTACNVCHDNGAGRAYSWARRAVPPVTIYYNFSSSNSSPTVKLNNKATSYPNVGP
SNICLPCHTGRGIGAMIYDAVAAGIDFSNTNSPGAHDFAAGAVLFRKGGYEFAGRDYVPTYFLHDKIGVANEHGTGNDGP
CVACHMNSGNSHFFMPVAFDGTGKIAEITSRTCAQCHVGQYALSPAILQTEKEGFAAAIAMLNVLKTDATLPVDPLNPTR
SKVRPLANKNSDYNAAFPGGGANTMGAFFNSGLLQNDPGAFAHNRVYTKRLIYDSIDWLSNGALDGDVESAINNATLAVN
SKTGKVSLSNPILGGFYIPEQVDGPAYAAAFAKVKADAIKYLLGAPGGARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64085; Mature: 64085

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKSLLFLFLVPVLVAGCGGGTSDNGVPISKLAASQGCMNLSCHGTMTSPGTGAVIADE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCEECCCCCCCEEEHH
WRASAHNLKNGAGCADCHEPDAGHPNTCSKCHGGGGFGVTKNPDQAGKCGKCHGLSHPGD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VMVARAPQHFGNMTASLANNKYRASYVSSNYVGNCRACHNPHDPSSAMNVNRDWAASGHA
EEEEECCHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
DVLAGARTGYDFKTRGSYQPASTTFQYYCVRCHTSTGYVKFVTSAFQDVRPFAGPGYEVV
CEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH
QNYPRTVAAGAAQPADTPSPDKTKEVTACNVCHDNGAGRAYSWARRAVPPVTIYYNFSSS
HCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCC
NSSPTVKLNNKATSYPNVGPSNICLPCHTGRGIGAMIYDAVAAGIDFSNTNSPGAHDFAA
CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
GAVLFRKGGYEFAGRDYVPTYFLHDKIGVANEHGTGNDGPCVACHMNSGNSHFFMPVAFD
CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEC
GTGKIAEITSRTCAQCHVGQYALSPAILQTEKEGFAAAIAMLNVLKTDATLPVDPLNPTR
CCCCHHHHHHHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
SKVRPLANKNSDYNAAFPGGGANTMGAFFNSGLLQNDPGAFAHNRVYTKRLIYDSIDWLS
HHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHH
NGALDGDVESAINNATLAVNSKTGKVSLSNPILGGFYIPEQVDGPAYAAAFAKVKADAIK
CCCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
YLLGAPGGARP
HHHCCCCCCCC
>Mature Secondary Structure
MRLKSLLFLFLVPVLVAGCGGGTSDNGVPISKLAASQGCMNLSCHGTMTSPGTGAVIADE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCEECCCCCCCEEEHH
WRASAHNLKNGAGCADCHEPDAGHPNTCSKCHGGGGFGVTKNPDQAGKCGKCHGLSHPGD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VMVARAPQHFGNMTASLANNKYRASYVSSNYVGNCRACHNPHDPSSAMNVNRDWAASGHA
EEEEECCHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
DVLAGARTGYDFKTRGSYQPASTTFQYYCVRCHTSTGYVKFVTSAFQDVRPFAGPGYEVV
CEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHH
QNYPRTVAAGAAQPADTPSPDKTKEVTACNVCHDNGAGRAYSWARRAVPPVTIYYNFSSS
HCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCC
NSSPTVKLNNKATSYPNVGPSNICLPCHTGRGIGAMIYDAVAAGIDFSNTNSPGAHDFAA
CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
GAVLFRKGGYEFAGRDYVPTYFLHDKIGVANEHGTGNDGPCVACHMNSGNSHFFMPVAFD
CEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEC
GTGKIAEITSRTCAQCHVGQYALSPAILQTEKEGFAAAIAMLNVLKTDATLPVDPLNPTR
CCCCHHHHHHHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
SKVRPLANKNSDYNAAFPGGGANTMGAFFNSGLLQNDPGAFAHNRVYTKRLIYDSIDWLS
HHHHHHHCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHHHHHH
NGALDGDVESAINNATLAVNSKTGKVSLSNPILGGFYIPEQVDGPAYAAAFAKVKADAIK
CCCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
YLLGAPGGARP
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA