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The map label for this gene is 197119688

Identifier: 197119688

GI number: 197119688

Start: 3820127

End: 3820450

Strand: Direct

Name: 197119688

Synonym: Gbem_3323

Alternate gene names: NA

Gene position: 3820127-3820450 (Clockwise)

Preceding gene: 197119687

Following gene: 197119690

Centisome position: 82.77

GC content: 61.11

Gene sequence:

>324_bases
ATGTTTGCAAACGGCAGCGAAGAAGGTTACCTGGAAGTGCTTGAAGGTATCCGGCGCAAGACGCTGGTCTACGGCGATGA
AACCCTGATGGTGGAGTTCCTGCTGAGCGGGGGGGCGCGTCTTCCGCTGCACTCCCACCCGCATGAACAGACGGGCTACC
TGGTGAAAGGGAGGATGAGGCTTACCATAGGCGGGAATACACGCGAGTTGCTGCCGGGCGACAGCTGGTGCGTGGCGAAG
TGGGAGGAGCATGGCGCTGAGGTTGTCGAGGACTCGGTTGCGGTCGAGGTCTTCTCTCCGGTGCGCGAGGATTACCTCCC
CTGA

Upstream 100 bases:

>100_bases
CAAGGTCCGCAGCCTCAACCTCTCCACCTCGGCCGGGATCGTTCTTTACGAGGCCTTGCGTCAGACCGGTGCAGTCGAAG
GTGCATGAAAAGGAGTCCGC

Downstream 100 bases:

>100_bases
CCGCTTTCTTTCAGATCATGTTGTAGGCGAACATGGCGAAGCTTAACCCGATTACCAGGAAGGAGATCAAGGCAAGGAGC
CCATCCCGGGCGATCAAGGC

Product: cupin superfamily barrel domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Superfamily Barrel Domain-Containing Protein; Pectin Degradation Protein; Degradation Protein; Pectin Degradation Protein KdgF

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MFANGSEEGYLEVLEGIRRKTLVYGDETLMVEFLLSGGARLPLHSHPHEQTGYLVKGRMRLTIGGNTRELLPGDSWCVAK
WEEHGAEVVEDSVAVEVFSPVREDYLP

Sequences:

>Translated_107_residues
MFANGSEEGYLEVLEGIRRKTLVYGDETLMVEFLLSGGARLPLHSHPHEQTGYLVKGRMRLTIGGNTRELLPGDSWCVAK
WEEHGAEVVEDSVAVEVFSPVREDYLP
>Mature_107_residues
MFANGSEEGYLEVLEGIRRKTLVYGDETLMVEFLLSGGARLPLHSHPHEQTGYLVKGRMRLTIGGNTRELLPGDSWCVAK
WEEHGAEVVEDSVAVEVFSPVREDYLP

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11974; Mature: 11974

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFANGSEEGYLEVLEGIRRKTLVYGDETLMVEFLLSGGARLPLHSHPHEQTGYLVKGRMR
CCCCCCCCCHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECEEE
LTIGGNTRELLPGDSWCVAKWEEHGAEVVEDSVAVEVFSPVREDYLP
EEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFANGSEEGYLEVLEGIRRKTLVYGDETLMVEFLLSGGARLPLHSHPHEQTGYLVKGRMR
CCCCCCCCCHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECEEE
LTIGGNTRELLPGDSWCVAKWEEHGAEVVEDSVAVEVFSPVREDYLP
EEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA