| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119547
Identifier: 197119547
GI number: 197119547
Start: 3664562
End: 3665074
Strand: Direct
Name: 197119547
Synonym: Gbem_3177
Alternate gene names: NA
Gene position: 3664562-3665074 (Clockwise)
Preceding gene: 197119544
Following gene: 197119548
Centisome position: 79.4
GC content: 55.36
Gene sequence:
>513_bases ATGCTGCCACAACATCCGCACGACGAAGAGACTCCCCGCATCAGGGAAATGAGCATTGACGATCTGCCGGAGGTGTTTCA CATAGGCGAGGAACTTTTCACCGCCGAATATTCACAAAGCCTCTACAGGACCTGGGACGAATACGAGATCACCACCCTTT TCAACAGCGACAACGAGCTCTGCATAGTGGCGGAGCACGAGGAGCGGATACTCGGCTTCGCCCTGGGGACCACGGTGAAA AAACACGGCTCCCCCTGGAAATACGGCTACCTCGTTTGGCTCGGGGTGCGGCGCGACCTGCAGAAAATGCACGTAGGCGA GCGCCTCTTCAAGGAGCTGAAGCGGCGCTTCAAGGAACAGGGGGTGCGCATGATCATCATCGATACCTCGGCCGACAACA AGCCGGCCATCAAGTTCTTTCAAAAGCATGGCTTCGACAACATCCAGGAGCACGTGTACATGACCCTGAACCTGTCCAAG AGAAGCAAGAAGAAACCGGTGAAAAAGCCATGA
Upstream 100 bases:
>100_bases CACCTGCCCGACAGAATCAGAAAAAAATAGTGTCTCGGCTCGCAGTAAGGGACCTGTTATAATGTCCGTGAGGTAAATAA AACGTGTCACGAGGTACGCA
Downstream 100 bases:
>100_bases CCGGGCGCCTGGAGGAGGTTTTCGCCGCCATCGATCCGGCACGTCTCAAGGGAACCCTGCTGGAGATGCTGGACATATAT TCCCCCTCGGGGAAGGAGGA
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Acetyltransferase-Like; GNAT Family Acetyltransferase; N-Acetyltransferase-Like Protein; N-Terminal Acetyltransferase; Acetyltransferase
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLPQHPHDEETPRIREMSIDDLPEVFHIGEELFTAEYSQSLYRTWDEYEITTLFNSDNELCIVAEHEERILGFALGTTVK KHGSPWKYGYLVWLGVRRDLQKMHVGERLFKELKRRFKEQGVRMIIIDTSADNKPAIKFFQKHGFDNIQEHVYMTLNLSK RSKKKPVKKP
Sequences:
>Translated_170_residues MLPQHPHDEETPRIREMSIDDLPEVFHIGEELFTAEYSQSLYRTWDEYEITTLFNSDNELCIVAEHEERILGFALGTTVK KHGSPWKYGYLVWLGVRRDLQKMHVGERLFKELKRRFKEQGVRMIIIDTSADNKPAIKFFQKHGFDNIQEHVYMTLNLSK RSKKKPVKKP >Mature_170_residues MLPQHPHDEETPRIREMSIDDLPEVFHIGEELFTAEYSQSLYRTWDEYEITTLFNSDNELCIVAEHEERILGFALGTTVK KHGSPWKYGYLVWLGVRRDLQKMHVGERLFKELKRRFKEQGVRMIIIDTSADNKPAIKFFQKHGFDNIQEHVYMTLNLSK RSKKKPVKKP
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20162; Mature: 20162
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQHPHDEETPRIREMSIDDLPEVFHIGEELFTAEYSQSLYRTWDEYEITTLFNSDNEL CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCE CIVAEHEERILGFALGTTVKKHGSPWKYGYLVWLGVRRDLQKMHVGERLFKELKRRFKEQ EEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GVRMIIIDTSADNKPAIKFFQKHGFDNIQEHVYMTLNLSKRSKKKPVKKP CCEEEEEECCCCCCHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MLPQHPHDEETPRIREMSIDDLPEVFHIGEELFTAEYSQSLYRTWDEYEITTLFNSDNEL CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCE CIVAEHEERILGFALGTTVKKHGSPWKYGYLVWLGVRRDLQKMHVGERLFKELKRRFKEQ EEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GVRMIIIDTSADNKPAIKFFQKHGFDNIQEHVYMTLNLSKRSKKKPVKKP CCEEEEEECCCCCCHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA